RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 TCRBV5S2A0A599 114 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 PABPN1LA6NDY0 278 aaKnown RBP5.82□□□□□ -1.48
HERC1-208ENST00000560462 FRG2CA6NGY1 282 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 MSTNO14793 375 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 TIMM23O14925 209 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 B4GALT2O60909 372 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 APOL3O95236 402 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 SLC4A1P02730 911 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 NUDT17P0C025 328 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 PCMT1P22061 227 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 CA4P22748 312 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 HTR7P34969 479 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 TPI1P60174 286 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 CHRNEQ04844 493 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 BOP1Q14137 746 aaKnown RBP5.82□□□□□ -1.48
HERC1-208ENST00000560462 PGGHGQ32M88 737 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 ATP13A5Q4VNC0 1218 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 KLHL22Q53GT1 634 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 PRAMEF9Q5VWM5 478 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 FRMPD2BQ6IN97 320 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 ARHGEF19Q8IW93 802 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 CFAP206Q8IYR0 622 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 EMC1Q8N766 993 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 LILRB1Q8NHL6 650 aaPredicted RBP5.82□□□□□ -1.48
HERC1-208ENST00000560462 NRG4Q8WWG1 115 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 CCT6BQ92526 530 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 MAML1Q92585 1016 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 UCN3Q969E3 161 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 INTS12Q96CB8 462 aaKnown RBP5.82□□□□□ -1.48
HERC1-208ENST00000560462 SLC39A3Q9BRY0 314 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 TRAF4Q9BUZ4 470 aaPredicted RBP5.82□□□□□ -1.48
HERC1-208ENST00000560462 NTMT1Q9BV86 223 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 SUCNR1Q9BXA5 334 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 TDRD1Q9BXT4 1180 aaKnown RBP5.82□□□□□ -1.48
HERC1-208ENST00000560462 RSPO3Q9BXY4 272 aaPredicted RBP5.82□□□□□ -1.48
HERC1-208ENST00000560462 XPO4Q9C0E2 1151 aaKnown RBP5.82□□□□□ -1.48
HERC1-208ENST00000560462 PITHD1Q9GZP4 211 aaPredicted RBP5.82□□□□□ -1.48
HERC1-208ENST00000560462 SLC6A15Q9H2J7 730 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 ESM1Q9NQ30 184 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 DDX28Q9NUL7 540 aaKnown RBP5.82□□□□□ -1.48
HERC1-208ENST00000560462 EXOC1Q9NV70 894 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.82□□□□□ -1.48
HERC1-208ENST00000560462 TMEM59LQ9UK28 342 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 USP22Q9UPT9 525 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 B3GALT5Q9Y2C3 310 aa5.82□□□□□ -1.48
HERC1-208ENST00000560462 GOLGA6L4A6NEF3 574 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 GOLGA6L9A6NEM1 432 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 OR2W5A6NFC9 320 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 A8MVJ9 347 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 H3BQV1 296 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 CLOCKO15516 846 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 CCP110O43303 1012 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 CTSVO60911 334 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 PPP1R3DO95685 299 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 PEX11BO96011 259 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 CD8AP01732 235 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 HSP90AA1P07900 732 aaKnown RBP5.81□□□□□ -1.48
HERC1-208ENST00000560462 POU2F1P14859 743 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 FAHP16930 419 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 CNR1P21554 472 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 TNFSF4P23510 183 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 PEBP1P30086 187 aaKnown RBP5.81□□□□□ -1.48
HERC1-208ENST00000560462 SDC4P31431 198 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 CD86P42081 329 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 MMP13P45452 471 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 TRPC1P48995 793 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 SSR4P51571 173 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 KCNJ2P63252 427 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 EEF1A1P68104 462 aaKnown RBP5.81□□□□□ -1.48
HERC1-208ENST00000560462 MAT1AQ00266 395 aaKnown RBP5.81□□□□□ -1.48
HERC1-208ENST00000560462 CRYZQ08257 329 aaKnown RBP5.81□□□□□ -1.48
HERC1-208ENST00000560462 DBPQ10586 325 aaPredicted RBP5.81□□□□□ -1.48
HERC1-208ENST00000560462 CUL4BQ13620 913 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 PTK6Q13882 451 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 DPYSQ14117 519 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 NSDHLQ15738 373 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 TYSND1Q2T9J0 566 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 C3orf36Q3SXR2 165 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 LDLRAP1Q5SW96 308 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 EEF1A1P5Q5VTE0 462 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 SHQ1Q6PI26 577 aaKnown RBP5.81□□□□□ -1.48
HERC1-208ENST00000560462 FAM47EQ6ZV65 393 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 SYDE1Q6ZW31 735 aaPredicted RBP5.81□□□□□ -1.48
HERC1-208ENST00000560462 DET1Q7L5Y6 550 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 ARCQ7LC44 396 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 GCNT2Q8N0V5 402 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 RASGEF1CQ8N431 466 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 LILRA3Q8N6C8 439 aaPredicted RBP5.81□□□□□ -1.48
HERC1-208ENST00000560462 CDYL2Q8N8U2 506 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 ZDHHC22Q8N966 263 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 IQUBQ8NA54 791 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 RAB3IL1Q8TBN0 382 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 CALML6Q8TD86 181 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 GTF3AQ92664 365 aaKnown RBP5.81□□□□□ -1.48
HERC1-208ENST00000560462 HTRA1Q92743 480 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 RGMAQ96B86 450 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 MISP3Q96FF7 219 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 TIMP4Q99727 224 aa5.81□□□□□ -1.48
HERC1-208ENST00000560462 RBM4BQ9BQ04 359 aaKnown RBP5.81□□□□□ -1.48
HERC1-208ENST00000560462 SOX7Q9BT81 388 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms