RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 CD1DP15813 335 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 TFEBP19484 476 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 NME2P22392 152 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 UQCRC1P31930 480 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 AVPR1BP47901 424 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 CYB561P49447 251 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 AGTR2P50052 363 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 SEC24CP53992 1094 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 EMP3P54852 163 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 DNAJB13P59910 316 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 NAA20P61599 178 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 IRF9Q00978 393 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 ACTN3Q08043 901 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-215ENST00000560424 HSPA14Q0VDF9 509 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 ASPHQ12797 758 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 DLG1Q12959 904 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 PDAP1Q13442 181 aaKnown RBP8.71□□□□□ -1.02
SMAD3-215ENST00000560424 PCLAFQ15004 111 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 PCBP2Q15366 365 aaKnown RBP eCLIP8.71□□□□□ -1.02
SMAD3-215ENST00000560424 NDUFA9Q16795 377 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 SYT16Q17RD7 645 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 TECRLQ5HYJ1 363 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 SHEQ5VZ18 495 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 TTC19Q6DKK2 380 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-215ENST00000560424 H3F3CQ6NXT2 135 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 ZYG11AQ6WRX3 759 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 LANCL3Q6ZV70 420 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 CHSY3Q70JA7 882 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 RNF44Q7L0R7 432 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 ZNF771Q7L3S4 317 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-215ENST00000560424 WDR53Q7Z5U6 358 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-215ENST00000560424 ISCA2Q86U28 154 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 NUDCD3Q8IVD9 361 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 CSNK1A1LQ8N752 337 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 LMNTD1Q8N9Z9 388 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 M1APQ8TC57 530 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 CD200R1Q8TD46 325 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 MCOLN3Q8TDD5 553 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 KCTD4Q8WVF5 259 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 SREK1Q8WXA9 508 aaKnown RBP8.71□□□□□ -1.02
SMAD3-215ENST00000560424 KIAA1191Q96A73 305 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 NXNL1Q96CM4 212 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 SARGQ9BW04 601 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 DRC3Q9H069 523 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 OXSMQ9NWU1 459 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 RUVBL1Q9Y265 456 aaKnown RBP8.71□□□□□ -1.02
SMAD3-215ENST00000560424 NSD1Q96L73 2696 aaPredicted RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 SCN2AQ99250 2005 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 A0A0A6YYC8 382 aaPredicted RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 SLC5A10A0PJK1 596 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 FIGNL2A6NMB9 653 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 TMEM114B3SHH9 223 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 I3L1I5 382 aaPredicted RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 CDK2AP1O14519 115 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 TXNDC9O14530 226 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 NDUFAB1O14561 156 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 KPNA5O15131 536 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 SNX3O60493 162 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 TRIM13O60858 407 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 PDE9AO76083 593 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 SERPINE1P05121 402 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 CYC1P08574 325 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 VIMP08670 466 aaKnown RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 ENO3P13929 434 aaPredicted RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 ATP5F1P24539 256 aaPredicted RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 PSMB5P28074 263 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 CMPK1P30085 196 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 ALDH3A1P30838 453 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 HOXC12P31275 282 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 FMO4P31512 558 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 RFC3P40938 356 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 NKX6-1P78426 367 aaPredicted RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 MAT1AQ00266 395 aaKnown RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 OCRLQ01968 901 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 GALNT1Q10472 559 aaPredicted RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 SNTB1Q13884 538 aaKnown RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 CSHL1Q14406 222 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 GBX1Q14549 363 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 SLC25A35Q3KQZ1 300 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 RNFT1Q5M7Z0 435 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 GARNL3Q5VVW2 1013 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 LIPMQ5VYY2 423 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 PTRHD1Q6GMV3 140 aaKnown RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 PAQR3Q6TCH7 311 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 MICALCLQ6ZW33 695 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 CPLX4Q7Z7G2 160 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 P3H2Q8IVL5 708 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 SLC22A9Q8IVM8 553 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 ZC3H7AQ8IWR0 971 aaKnown RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 LRRC34Q8IZ02 419 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 KIRREL3Q8IZU9 778 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 LGI4Q8N135 537 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 RPRMLQ8N4K4 120 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 AMER2Q8N7J2 671 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 AMER3Q8N944 861 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 SIMC1Q8NDZ2 872 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 OR2L3Q8NG85 312 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 GIMAP7Q8NHV1 300 aa8.7□□□□□ -1.02
SMAD3-215ENST00000560424 SKA2Q8WVK7 121 aaPredicted RBP8.7□□□□□ -1.02
SMAD3-215ENST00000560424 ANKRD49Q8WVL7 239 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms