RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RPS17P08708 135 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 PYGBP11216 843 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 CD96P40200 585 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 CCNG1P51959 295 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 RAP1GDS1P52306 607 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 HNRNPH2P55795 449 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 PMP22Q01453 160 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 SLAMF1Q13291 335 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 TUBA3CQ13748 450 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 MEP1AQ16819 746 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 RPUSD3Q6P087 351 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 METTL2BQ6P1Q9 378 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 TUBA3EQ6PEY2 450 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 RPS19BP1Q86WX3 136 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 FAM26EQ8N5C1 309 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 SLC5A8Q8N695 610 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 APCDD1LQ8NCL9 501 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 SRFBP1Q8NEF9 429 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 PRR7Q8TB68 274 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 ADAMTS18Q8TE60 1221 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 ZNF483Q8TF39 744 aaPredicted RBP10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 THAP3Q8WTV1 239 aaPredicted RBP10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 FAR1Q8WVX9 515 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 ATP6V1E2Q96A05 226 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 RGMAQ96B86 450 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 ANKRD9Q96BM1 317 aaPredicted RBP10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 MTBPQ96DY7 904 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 ROGDIQ9GZN7 287 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 ANKZF1Q9H8Y5 726 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 PSMC3IPQ9P2W1 217 aaPredicted RBP10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 FETUBQ9UGM5 382 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 TMCO1Q9UM00 188 aa10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 MRPS33Q9Y291 106 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-216ENST00000560243 TRBV11-1A0A0K0K1C0 115 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 IQANK1A0A1B0GTG1 560 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 ANKUB1A6NFN9 424 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 SMIM23A6NLE4 172 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 GABRR3A8MPY1 467 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 TMPRSS11DO60235 418 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 PRKNO60260 465 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 DLX3O60479 287 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 GBAP04062 536 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 PTX3P26022 381 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 TPP2P29144 1249 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 BSGP35613 385 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 SLCO1A2P46721 670 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 GPR143P51810 404 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 MLF1P58340 268 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 TAS2R50P59544 299 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 SGO1Q5FBB7 561 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 C18orf63Q68DL7 685 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 ZNF324BQ6AW86 544 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 SPINK14Q6IE38 97 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 LETMD1Q6P1Q0 360 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 C16orf47Q6ZP98 133 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 ZNF227Q86WZ6 799 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 OR4N5Q8IXE1 308 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 ZNF321PQ8N8H1 164 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 EIF1ADQ8N9N8 165 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 MDS2Q8NDY4 140 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 B3GNT7Q8NFL0 401 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 OR4F6Q8NGB9 312 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 PTPMT1Q8WUK0 201 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 UBLCP1Q8WVY7 318 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 UCN3Q969E3 161 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 NCLNQ969V3 563 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 REPS1Q96D71 796 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 NTMT1Q9BV86 223 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 ALOXE3Q9BYJ1 711 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 KLHL1Q9NR64 748 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 AGPAT4Q9NRZ5 378 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 FARSBQ9NSD9 589 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 ADGRE2Q9UHX3 823 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 ZNF225Q9UK10 706 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 EMCNQ9ULC0 261 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 ATG4BQ9Y4P1 393 aa10.87□□□□□ -0.67
RABGGTA-216ENST00000560243 CENPEQ02224 2701 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 MAST4O15021 2626 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 A0A0A6YYD5 115 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 FOXE1O00358 373 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 FGF17O60258 216 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 NEURL1O76050 574 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 IFNA16P05015 189 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 CPN2P22792 545 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 MST1P26927 711 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 TNFRSF8P28908 595 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 HSD17B3P37058 310 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 HERVK_113P63132 956 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 OC90Q02509 493 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 STX4Q12846 297 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 CUL3Q13618 768 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 RCN2Q14257 317 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 TERF2Q15554 542 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 OR1C1Q15619 314 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 ELAVL1Q15717 326 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 UNC50Q53HI1 259 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 ZNF766Q5HY98 468 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 FHL5Q5TD97 284 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 FRG2Q64ET8 278 aa10.86□□□□□ -0.67
RABGGTA-216ENST00000560243 FAM180AQ6UWF9 173 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms