RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ERVK-6Q9BXR3 956 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 COPS7BQ9H9Q2 264 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-213ENST00000560175 ADAP2Q9NPF8 381 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 MS4A12Q9NXJ0 267 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 VPS4AQ9UN37 437 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 ASB4Q9Y574 426 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 SVILO95425 2214 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 DOPEY2Q9Y3R5 2298 aa12.35□□□□□ -0.43
SMAD3-213ENST00000560175 SETXQ7Z333 2677 aaKnown RBP12.34□□□□□ -0.43
SMAD3-213ENST00000560175 A0A0A6YYD5 115 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 A8MUI8 341 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 PROM1O43490 865 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 MAN1A2O60476 641 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 ZIC2O95409 532 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-213ENST00000560175 OTCP00480 354 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 TAC1P20366 129 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 GNLYP22749 145 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 ATP5F1P24539 256 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-213ENST00000560175 TRHRP34981 398 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-213ENST00000560175 NEK2P51955 445 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 PRKAA2P54646 552 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 MLF1P58340 268 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 ZNF33BQ06732 778 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 SLAMF1Q13291 335 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 UBAP2LQ14157 1087 aaKnown RBP12.34□□□□□ -0.43
SMAD3-213ENST00000560175 ELAVL1Q15717 326 aaKnown RBP12.34□□□□□ -0.43
SMAD3-213ENST00000560175 WDR93Q6P2C0 686 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 MILR1Q7Z6M3 343 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 RPS19BP1Q86WX3 136 aaKnown RBP12.34□□□□□ -0.43
SMAD3-213ENST00000560175 CYP4X1Q8N118 509 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 BEST3Q8N1M1 668 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 KIF2BQ8N4N8 673 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 SLC5A8Q8N695 610 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 FAM47BQ8NA70 645 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 MDS2Q8NDY4 140 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 OR4F6Q8NGB9 312 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 GRHL3Q8TE85 626 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 PTPMT1Q8WUK0 201 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-213ENST00000560175 L3HYPDHQ96EM0 354 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 TAAR6Q96RI8 345 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 ALOXE3Q9BYJ1 711 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 AGPAT4Q9NRZ5 378 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 ZNF223Q9UK11 482 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-213ENST00000560175 EMCNQ9ULC0 261 aa12.34□□□□□ -0.43
SMAD3-213ENST00000560175 TMEM200CA6NKL6 621 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 GOLGA8RI6L899 631 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SAP18O00422 153 aaKnown RBP12.33□□□□□ -0.44
SMAD3-213ENST00000560175 PRAMEF2O60811 474 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 NUDT17P0C025 328 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 CRHR1P34998 444 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 CD96P40200 585 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SSR2P43308 183 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 UQCRFS1P47985 274 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 CDH13P55290 713 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 HNRNPH2P55795 449 aaKnown RBP12.33□□□□□ -0.44
SMAD3-213ENST00000560175 TAS2R50P59544 299 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 VSNL1P62760 191 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 PHEXP78562 749 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 CLCQ05315 142 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SLC18A2Q05940 514 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SLC13A2Q13183 592 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 TUBA3CQ13748 450 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 DDX39BQ13838 428 aaKnown RBP12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SERTAD2Q14140 314 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 FCRLBQ6BAA4 426 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 LETMD1Q6P1Q0 360 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 TUBA3EQ6PEY2 450 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 RPS27LQ71UM5 84 aaKnown RBP12.33□□□□□ -0.44
SMAD3-213ENST00000560175 GPR180Q86V85 440 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 ZNF227Q86WZ6 799 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 MYLK4Q86YV6 388 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SLC22A9Q8IVM8 553 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 TMEM132CQ8N3T6 1108 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 MORN4Q8NDC4 146 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 ST6GALNAC3Q8NDV1 305 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 TANKQ92844 425 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 ATP6V1E2Q96A05 226 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SCMH1Q96GD3 660 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SERPINI1Q99574 410 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SLX1AQ9BQ83 275 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 CENPKQ9BS16 269 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SORBS1Q9BX66 1292 aaKnown RBP12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SLC29A3Q9BZD2 475 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 CDCP1Q9H5V8 836 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 BRF2Q9HAW0 419 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 SEMA4BQ9NPR2 832 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-213ENST00000560175 TBK1Q9UHD2 729 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 TRPS1Q9UHF7 1281 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 ADAM29Q9UKF5 820 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 ATG4BQ9Y4P1 393 aa12.33□□□□□ -0.44
SMAD3-213ENST00000560175 USP9YO00507 2555 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-213ENST00000560175 A8MUA0 341 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 G3V2L1 256 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 TMPRSS11DO60235 418 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 CDH16O75309 829 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 GLRA3O75311 464 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 SH3BGRLO75368 114 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 EEDO75530 441 aaKnown RBP12.32□□□□□ -0.44
SMAD3-213ENST00000560175 NEURL1O76050 574 aa12.32□□□□□ -0.44
SMAD3-213ENST00000560175 MYO1DO94832 1006 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms