RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 MAL2Q969L2 176 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 LRFN5Q96NI6 719 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 YDJCA8MPS7 323 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 MATN3O15232 486 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 GJB1P08034 283 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 PRKCAP17252 672 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 CYP27C1Q4G0S4 372 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 HS3ST5Q8IZT8 346 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 DEDD2Q8WXF8 326 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 ITM2CQ9NQX7 267 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 KIF25Q9UIL4 384 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 TMPRSS12Q86WS5 348 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 LNX1Q8TBB1 728 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 BTF3L4Q96K17 158 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 PCDHA2Q9Y5H9 948 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 CNTNAP1P78357 1384 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 PMS2P3Q13401 168 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 ISOC1Q96CN7 298 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 G6PC3Q9BUM1 346 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 MAGEH1Q9H213 219 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 SMIM30A4D0T7 59 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 SEC14L6B5MCN3 397 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 F5H5P2 479 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 PFKLP17858 780 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 PDSS2Q86YH6 399 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 BOLLQ8N9W6 283 aaKnown RBP13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 HBEGFQ99075 208 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 LRRC7Q96NW7 1537 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 LCMT2O60294 686 aaKnown RBP13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 DNAJB5O75953 348 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 PDGFRLQ15198 375 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 SGCAQ16586 387 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 SLAIN1Q8ND83 568 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 HMCESQ96FZ2 354 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 PCDHAC1Q9H158 963 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 TMEM14AQ9Y6G1 99 aa13.37□□□□□ -0.27
CSPG4P12-202ENST00000559989 H3BSA7 217 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 C6P13671 934 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 TACR2P21452 398 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 CDK6Q00534 326 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 ARL16Q0P5N6 197 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 SDHAF4Q5VUM1 108 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 NAPRTQ6XQN6 538 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 LYSMD3Q7Z3D4 306 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 SGPP2Q8IWX5 399 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 RXFP3Q9NSD7 469 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 STUB1Q9UNE7 303 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 LSM5Q9Y4Y9 91 aaKnown RBP13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 MAP3K4Q9Y6R4 1608 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 A0A087WUU8 490 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 GGT3PA6NGU5 568 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 GRXCR1A8MXD5 290 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 OR7A17O14581 309 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 HEXBP07686 556 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 MRPL3P09001 348 aaKnown RBP13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF43P17038 809 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 XRCC1P18887 633 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 SNTB2Q13425 540 aaKnown RBP13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 HEBP1Q9NRV9 189 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF446Q9NWS9 450 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 ACAD8Q9UKU7 415 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 RTCAO00442 366 aaKnown RBP13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 CD6P30203 668 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 AQP2P41181 271 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 DSC2Q02487 901 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 COQ5Q5HYK3 327 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 CCNJQ5T5M9 372 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF574Q6ZN55 896 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 RPF2Q9H7B2 306 aaKnown RBP13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 NCDNQ9UBB6 729 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 LGALS13Q9UHV8 139 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 MGST1P10620 155 aaKnown RBP13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 FBXO48Q5FWF7 155 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 NAA40Q86UY6 237 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 SPPL2BQ8TCT7 592 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 SNAPC3Q92966 411 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 CASD1Q96PB1 797 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 SNX18Q96RF0 628 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 VPS25Q9BRG1 176 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 PREBQ9HCU5 417 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 EIF2B3Q9NR50 452 aaKnown RBP13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 GLI2P10070 1586 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 SLC7A4O43246 635 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 RFPL2O75678 378 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 FAM205BPQ63HN1 556 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 AWAT2Q6E213 333 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 LIX1LQ8IVB5 337 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 SLC32A1Q9H598 525 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 EPHA1P21709 976 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 GGT2P36268 569 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 GTF2BQ00403 316 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 NFATC4Q14934 902 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 RSPRY1Q96DX4 576 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 HCN4Q9Y3Q4 1203 aa13.36□□□□□ -0.27
CSPG4P12-202ENST00000559989 TRBV2A0A0J9YWF9 115 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF891A8MT65 544 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 SOX14O95416 240 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 VIPR1P32241 457 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 ADCYAP1R1P41586 468 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms