RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 OR1N1Q8NGS0 311 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 WDR20Q8TBZ3 569 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 TRPC4APQ8TEL6 797 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 SREK1Q8WXA9 508 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 TANKQ92844 425 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 TSLPQ969D9 159 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 TMEM125Q96AQ2 219 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 MIB2Q96AX9 1013 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 SNRNP40Q96DI7 357 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 MTFMTQ96DP5 389 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 ART5Q96L15 291 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 QRFPRQ96P65 431 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 DGAT2Q96PD7 388 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 CDK15Q96Q40 435 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 MESP1Q9BRJ9 268 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 UTP23Q9BRU9 249 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 C1QTNF3Q9BXJ4 246 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 MS4A8Q9BY19 250 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 ALOXE3Q9BYJ1 711 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 DEFB126Q9BYW3 111 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 TXLNGYQ9BZA5 131 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 OR51B5Q9H339 312 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 RPF2Q9H7B2 306 aaKnown RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 ANKZF1Q9H8Y5 726 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 BRF2Q9HAW0 419 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 ZBTB20Q9HC78 741 aaPredicted RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 ADAP2Q9NPF8 381 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 SEMA4BQ9NPR2 832 aaPredicted RBP4.1□□□□□ -1.75
SNX1-205ENST00000559339 DMRT3Q9NQL9 472 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 PRDM7Q9NQW5 492 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 LANCL2Q9NS86 450 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 ZNF358Q9NW07 568 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 TMEM216Q9P0N5 145 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 LUZP4Q9P127 313 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 COPS7AQ9UBW8 275 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 VTI1BQ9UEU0 232 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 PHF11Q9UIL8 331 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 MID2Q9UJV3 735 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 PCTPQ9UKL6 214 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 FBXW2Q9UKT8 454 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 PPT2Q9UMR5 302 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 PLAAQ9Y263 795 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 RNF11Q9Y3C5 154 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 HEATR5BQ9P2D3 2071 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 CNTRLQ7Z7A1 2325 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 NBASA2RRP1 2371 aa4.1□□□□□ -1.75
SNX1-205ENST00000559339 TLDC2A0PJX2 215 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 ANKUB1A6NFN9 424 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 LRRC14BA6NHZ5 514 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 A8MT66 165 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 A8MUA0 341 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 C17orf105B2RV13 164 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 TCP11X1B4DZS4 312 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PYCARD-AS1I3L0S3 204 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 RTCAO00442 366 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 PLPP1O14494 284 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PROM1O43490 865 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 OR10H2O60403 315 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PRAMEF2O60811 474 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 LDB3O75112 727 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 DNAJB6O75190 326 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 ZFAND5O76080 213 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 SCELO95171 688 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 WDPCPO95876 746 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 TBX6O95947 436 aaPredicted RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 F10P00742 488 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 SHBGP04278 402 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 CELA2AP08217 269 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 RPS17P08708 135 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 NUDT17P0C025 328 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 FAM58BPP0C7Q3 252 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 HSD3B1P14060 373 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 HSD3B2P26439 372 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 GCAP28676 217 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 HMOX2P30519 316 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 CRHR1P34998 444 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 DEKP35659 375 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 SOX11P35716 441 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 HSD17B3P37058 310 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 CD97P48960 835 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 EFNA3P52797 238 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 MAPK12P53778 367 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PRKAA2P54646 552 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 CDH13P55290 713 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PKNOX1P55347 436 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 VSNL1P62760 191 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PLIN5Q00G26 463 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 ASPHQ12797 758 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 LCP2Q13094 533 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 MAPKAPK3Q16644 382 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 IMPG1Q17R60 797 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 SGO1Q5FBB7 561 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 ZNF678Q5SXM1 525 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 CCNYL2Q5T2Q4 361 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 FHL5Q5TD97 284 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 C6orf163Q5TEZ5 329 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 H3F3CQ6NXT2 135 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 RPUSD3Q6P087 351 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 ZYG11AQ6WRX3 759 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 HSDL2Q6YN16 418 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms