RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 HIVEP3Q5T1R4 2406 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 ZGRF1Q86YA3 2104 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 CROCCQ5TZA2 2017 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 IGLV3-12A0A075B6K2 115 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 TRAV17A0A0B4J275 112 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 TRGV8A0A0C4DH27 118 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 USP27XA6NNY8 438 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 FAM227AF5H4B4 570 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 E2F3O00716 465 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 NDUFS4O43181 175 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 LCMT2O60294 686 aaKnown RBP6.9□□□□□ -1.3
SPG11-213ENST00000558988 ZG16O60844 167 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 B4GALT2O60909 372 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 BMP10O95393 424 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 WDPCPO95876 746 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 C8GP07360 202 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 SLC35G6P0C7Q6 338 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 GABRB3P28472 473 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 GRK3P35626 688 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 SLC26A3P40879 764 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 EFNA3P52797 238 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 IL2P60568 153 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 CSNK1G2P78368 415 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 MRPS25P82663 173 aaKnown RBP6.9□□□□□ -1.3
SPG11-213ENST00000558988 DR1Q01658 176 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 ACTN3Q08043 901 aaPredicted RBP6.9□□□□□ -1.3
SPG11-213ENST00000558988 TUBA3CQ13748 450 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 ABRAXAS2Q15018 415 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 DEFB134Q4QY38 66 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 HECTD2Q5U5R9 776 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 CAPN13Q6MZZ7 669 aaPredicted RBP6.9□□□□□ -1.3
SPG11-213ENST00000558988 LRRC8EQ6NSJ5 796 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 HIBCHQ6NVY1 386 aaPredicted RBP6.9□□□□□ -1.3
SPG11-213ENST00000558988 TUBA3EQ6PEY2 450 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 TRMT10BQ6PF06 316 aaKnown RBP6.9□□□□□ -1.3
SPG11-213ENST00000558988 CPEB2Q7Z5Q1 589 aaKnown RBP6.9□□□□□ -1.3
SPG11-213ENST00000558988 LMNTD2Q8IXW0 634 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 PDIK1LQ8N165 341 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 SUN3Q8TAQ9 357 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 SLC13A3Q8WWT9 602 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 PSMF1Q92530 271 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 MOCOSQ96EN8 888 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 MVB12AQ96EY5 273 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 EGFL8Q99944 293 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 TRIM54Q9BYV2 358 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 UNKQ9C0B0 810 aaKnown RBP6.9□□□□□ -1.3
SPG11-213ENST00000558988 TGIF2Q9GZN2 237 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 KCNK13Q9HB14 408 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 KLHL1Q9NR64 748 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 STMN3Q9NZ72 180 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 KLHL42Q9P2K6 505 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 ADAM29Q9UKF5 820 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 NAALAD2Q9Y3Q0 740 aa6.9□□□□□ -1.3
SPG11-213ENST00000558988 DIDO1Q9BTC0 2240 aaKnown RBP6.9□□□□□ -1.3
SPG11-213ENST00000558988 USP9XQ93008 2570 aaPredicted RBP6.9□□□□□ -1.31
SPG11-213ENST00000558988 CACNA1DQ01668 2161 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 ARHGAP10A1A4S6 786 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 H0YIG0 161 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 CDC7O00311 574 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 TTI1O43156 1089 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 PIAS1O75925 651 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 UNC5CO95185 931 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 RASAL1O95294 804 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 NSA2O95478 260 aaKnown RBP6.89□□□□□ -1.31
SPG11-213ENST00000558988 TTC4O95801 387 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 AHSGP02765 367 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 TP53P04637 393 aaPredicted RBP6.89□□□□□ -1.31
SPG11-213ENST00000558988 ZNF888P0CJ79 500 aaPredicted RBP6.89□□□□□ -1.31
SPG11-213ENST00000558988 TCP1P17987 556 aaKnown RBP6.89□□□□□ -1.31
SPG11-213ENST00000558988 MAKP20794 623 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 HRH2P25021 359 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 DCTP40126 519 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 TNFSF10P50591 281 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 CCR8P51685 355 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 ITGA8P53708 1063 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 PER3P56645 1201 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 RAB8AP61006 207 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 GNG11P61952 73 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 TIAL1Q01085 375 aaKnown RBP eCLIP6.89□□□□□ -1.31
SPG11-213ENST00000558988 OC90Q02509 493 aaPredicted RBP6.89□□□□□ -1.31
SPG11-213ENST00000558988 PDIA2Q13087 525 aaKnown RBP6.89□□□□□ -1.31
SPG11-213ENST00000558988 SP140Q13342 867 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 FAM53BQ14153 422 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 CSHL1Q14406 222 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 ZNF460Q14592 562 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 RBBP5Q15291 538 aaKnown RBP6.89□□□□□ -1.31
SPG11-213ENST00000558988 NSDHLQ15738 373 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 ANKRD39Q53RE8 183 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 SFT2D3Q587I9 215 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 CATSPEREQ5SY80 951 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 ARMC3Q5W041 872 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 IGFL2Q6UWQ7 119 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 GFRALQ6UXV0 394 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 Q6ZSN1 163 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 ANKRD37Q7Z713 158 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 PCGF5Q86SE9 256 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 TMPRSS11BQ86T26 416 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 PDSS2Q86YH6 399 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 BEST3Q8N1M1 668 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 ARHGEF39Q8N4T4 335 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms