RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 CYB561P49447 251 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 HLCSP50747 726 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 PFKFB4Q16877 469 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.85■□□□□ 0.13
LRRC28-210ENST00000558879 DEPDC1Q5TB30 811 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 LIPJQ5W064 366 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 METTL2BQ6P1Q9 378 aaKnown RBP15.85■□□□□ 0.13
LRRC28-210ENST00000558879 CLNKQ7Z7G1 428 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 RNF175Q8N4F7 328 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 HUS1BQ8NHY5 278 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 CMTM7Q96FZ5 175 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 PAFAH2Q99487 392 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 ZNF717Q9BY31 904 aaPredicted RBP15.85■□□□□ 0.13
LRRC28-210ENST00000558879 DMRT3Q9NQL9 472 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 VTI1BQ9UEU0 232 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 ADGRE2Q9UHX3 823 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 ITPR2Q14571 2701 aa15.85■□□□□ 0.13
LRRC28-210ENST00000558879 TMEM200CA6NKL6 621 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 H0YIV9 168 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 PLPP1O14494 284 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 ITGA10O75578 1167 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 FREM3P0C091 2139 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 DCTP40126 519 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 SSR2P43308 183 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 ARFIP1P53367 373 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 IGLV3-21P80748 117 aaPredicted RBP15.84■□□□□ 0.13
LRRC28-210ENST00000558879 ALDH6A1Q02252 535 aaKnown RBP15.84■□□□□ 0.13
LRRC28-210ENST00000558879 GTF2H2Q13888 395 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 GLE1Q53GS7 698 aaKnown RBP15.84■□□□□ 0.13
LRRC28-210ENST00000558879 GTF2H2CQ6P1K8 395 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 KLC3Q6P597 504 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 Q6ZPB1 254 aaPredicted RBP15.84■□□□□ 0.13
LRRC28-210ENST00000558879 CHSY3Q70JA7 882 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 GOLGA7Q7Z5G4 137 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 TMEM132CQ8N3T6 1108 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 L3MBTL4Q8NA19 623 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 MNS1Q8NEH6 495 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 ZNF835Q9Y2P0 537 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 CELSR2Q9HCU4 2923 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 ARHGAP21Q5T5U3 1957 aa15.84■□□□□ 0.13
LRRC28-210ENST00000558879 LDB3O75112 727 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 SIX3O95343 332 aaPredicted RBP15.83■□□□□ 0.12
LRRC28-210ENST00000558879 MLYCDO95822 493 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 INHBAP08476 426 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 CTAGE8P0CG41 777 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 PIK3CGP48736 1102 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 SERPINB9P50453 376 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 RBPJQ06330 500 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 SERTAD2Q14140 314 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 AP5B1Q2VPB7 878 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 KRTCAP3Q53RY4 240 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 ZNF787Q6DD87 383 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.83■□□□□ 0.12
LRRC28-210ENST00000558879 CTAGE4Q8IX94 777 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 ZCCHC7Q8N3Z6 543 aaKnown RBP15.83■□□□□ 0.12
LRRC28-210ENST00000558879 CPSF7Q8N684 471 aaKnown RBP15.83■□□□□ 0.12
LRRC28-210ENST00000558879 MORN4Q8NDC4 146 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 OR14A16Q8NHC5 309 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 WDR20Q8TBZ3 569 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 PTPMT1Q8WUK0 201 aaPredicted RBP15.83■□□□□ 0.12
LRRC28-210ENST00000558879 DCAKDQ8WVC6 231 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 ZNF592Q92610 1267 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 DAZLQ92904 295 aaKnown RBP15.83■□□□□ 0.12
LRRC28-210ENST00000558879 ANKRD9Q96BM1 317 aaPredicted RBP15.83■□□□□ 0.12
LRRC28-210ENST00000558879 CCDC120Q96HB5 630 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 ALOXE3Q9BYJ1 711 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 VPS11Q9H270 941 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 OR51B5Q9H339 312 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 ZNF358Q9NW07 568 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 CPSF2Q9P2I0 782 aaKnown RBP15.83■□□□□ 0.12
LRRC28-210ENST00000558879 ZNF180Q9UJW8 692 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 FBXW2Q9UKT8 454 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 PPT2Q9UMR5 302 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 KLF13Q9Y2Y9 288 aaPredicted RBP15.83■□□□□ 0.12
LRRC28-210ENST00000558879 ANGPTL3Q9Y5C1 460 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 PCDHGA11Q9Y5H2 935 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 TNPO3Q9Y5L0 923 aaKnown RBP15.83■□□□□ 0.12
LRRC28-210ENST00000558879 CENPEQ02224 2701 aa15.83■□□□□ 0.12
LRRC28-210ENST00000558879 TEX15Q9BXT5 2789 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 SAP18O00422 153 aaKnown RBP15.82■□□□□ 0.12
LRRC28-210ENST00000558879 SLC19A2O60779 497 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 SH3BGRLO75368 114 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 ZNF24P17028 368 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 TNFRSF17Q02223 184 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 DDX39BQ13838 428 aaKnown RBP15.82■□□□□ 0.12
LRRC28-210ENST00000558879 MAPKAPK3Q16644 382 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 RNFT1Q5M7Z0 435 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 OR4C11Q6IEV9 310 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 CHERPQ8IWX8 916 aaKnown RBP15.82■□□□□ 0.12
LRRC28-210ENST00000558879 CYP4Z2PQ8N1L4 340 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 ITLN2Q8WWU7 325 aaPredicted RBP15.82■□□□□ 0.12
LRRC28-210ENST00000558879 TMEM125Q96AQ2 219 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 MTERF1Q99551 399 aaKnown RBP15.82■□□□□ 0.12
LRRC28-210ENST00000558879 CCDC77Q9BR77 488 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 SORBS1Q9BX66 1292 aaKnown RBP15.82■□□□□ 0.12
LRRC28-210ENST00000558879 TSPAN10Q9H1Z9 355 aaPredicted RBP15.82■□□□□ 0.12
LRRC28-210ENST00000558879 IPPKQ9H8X2 491 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 ACTR8Q9H981 624 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 XPR1Q9UBH6 696 aa15.82■□□□□ 0.12
LRRC28-210ENST00000558879 SPACA6W5XKT8 324 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms