RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 HSD3B7Q9H2F3 369 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 ZNF665Q9H7R5 613 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.82□□□□□ -1.8
CASC4-206ENST00000558847 MED17Q9NVC6 651 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 KLK11Q9UBX7 282 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 WIPI2Q9Y4P8 454 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 CSNK1G3Q9Y6M4 447 aa3.82□□□□□ -1.8
CASC4-206ENST00000558847 A0A1W2PR80 420 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 P2RX6O15547 441 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 MLNRO43193 412 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 MAGEC1O60732 1142 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 REC8O95072 547 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 RPLP0P05388 317 aaKnown RBP3.81□□□□□ -1.8
CASC4-206ENST00000558847 SP1P08047 785 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 TPBGLP0DKB5 382 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 EVCP57679 992 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 OR1C1Q15619 314 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 CARTPTQ16568 116 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 C3AR1Q16581 482 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 GFI1BQ5VTD9 330 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 PRAMEF7Q5VXH5 474 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 BSPRYQ5W0U4 402 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 TRIM65Q6PJ69 517 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 Q6ZSR9 355 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 GET4Q7L5D6 327 aaPredicted RBP3.81□□□□□ -1.8
CASC4-206ENST00000558847 PTAR1Q7Z6K3 402 aaPredicted RBP3.81□□□□□ -1.8
CASC4-206ENST00000558847 RPLP0P6Q8NHW5 317 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 SMPDL3AQ92484 453 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 NR4A3Q92570 626 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 RAB39BQ96DA2 213 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 GPR137Q96N19 417 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 AGPAT1Q99943 283 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 NTMT1Q9BV86 223 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 PINK1Q9BXM7 581 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 DGCR6LQ9BY27 220 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 NACA2Q9H009 215 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 SDF2L1Q9HCN8 221 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 FGF22Q9HCT0 170 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 NLGN3Q9NZ94 848 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 NINJ2Q9NZG7 142 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 ACTR3BQ9P1U1 418 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 ERVK-18Q9QC07 812 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 MRTO4Q9UKD2 239 aaKnown RBP3.81□□□□□ -1.8
CASC4-206ENST00000558847 ISY1Q9ULR0 285 aaKnown RBP3.81□□□□□ -1.8
CASC4-206ENST00000558847 PLCL2Q9UPR0 1127 aa3.81□□□□□ -1.8
CASC4-206ENST00000558847 C19orf81C9J6K1 198 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 LMO7DNF2Z398 122 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 INPP4BO15327 924 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 TXNL1O43396 289 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 EDIL3O43854 480 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 ECE2O60344 883 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 LYNP07948 512 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 HIST1H2AGP0C0S8 130 aaPredicted RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 KRT5P13647 590 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 ETS1P14921 441 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 CCNA2P20248 432 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 CALRP27797 417 aaKnown RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 CCND2P30279 289 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 RPL9P32969 192 aaKnown RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 OR1D2P34982 312 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 TNFRSF4P43489 277 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 DHODHQ02127 395 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 TRADDQ15628 312 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 TMEM30BQ3MIR4 351 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 TEX35Q5T0J7 233 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 ADAMTSL4-AS1Q5T5F5 129 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 ARHGAP17Q68EM7 881 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 RTL6Q6ICC9 239 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 CAPN13Q6MZZ7 669 aaPredicted RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 CWC27Q6UX04 472 aaKnown RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 FRRS1Q6ZNA5 592 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 CATSPER4Q7RTX7 472 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 ADAMTSL2Q86TH1 951 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 ELMOD2Q8IZ81 293 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 TEX9Q8N6V9 391 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 NUP37Q8NFH4 326 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 OR9Q2Q8NGE9 314 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 OR52E1Q8NGJ3 308 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 OR10G7Q8NGN6 311 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 OR6F1Q8NGZ6 308 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 CD99L2Q8TCZ2 262 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 TCP11Q8WWU5 503 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 HIST1H2ACQ93077 130 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 WBP2Q969T9 261 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 TBC1D31Q96DN5 1066 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 ZNF486Q96H40 463 aaPredicted RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 SPATA13Q96N96 652 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 ZNF300Q96RE9 604 aaPredicted RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 SYT15Q9BQS2 421 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 PIGQQ9BRB3 760 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 RBM4Q9BWF3 364 aaKnown RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 FNDC4Q9H6D8 234 aaPredicted RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 NMUR1Q9HB89 426 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 B3GAT2Q9NPZ5 323 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 DDX28Q9NUL7 540 aaKnown RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 TEX10Q9NXF1 929 aaPredicted RBP3.8□□□□□ -1.8
CASC4-206ENST00000558847 FAM153AQ9UHL3 310 aa3.8□□□□□ -1.8
CASC4-206ENST00000558847 PLEKHA6Q9Y2H5 1048 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms