RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ATG4BQ9Y4P1 393 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 HEMK1Q9Y5R4 338 aaPredicted RBP12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 CNTRLQ7Z7A1 2325 aa12.97□□□□□ -0.33
TSPAN3-205ENST00000558745 A0A088AWK7 358 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 IGKV3D-11A0A0A0MRZ8 115 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 TCRBV16S1A1N1A0A5B0 115 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 MAN1A2O60476 641 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 ZNF10P21506 573 aaPredicted RBP12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 ALDH3A1P30838 453 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 HPDP32754 393 aaPredicted RBP12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 MLLT10P55197 1068 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 PHEXP78562 749 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 SRSF1Q07955 248 aaKnown RBP eCLIP12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 SLC13A2Q13183 592 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 CUL3Q13618 768 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 VWA5B1Q5TIE3 1220 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 AGAP7PQ5VUJ5 663 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 RIPOR1Q6ZS17 1223 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 SCUBE1Q8IWY4 988 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 KIF2BQ8N4N8 673 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 EFCAB3Q8N7B9 438 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 CATSPER1Q8NEC5 780 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 SREK1Q8WXA9 508 aaKnown RBP12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 AGAP4Q96P64 663 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 ZNF382Q96SR6 550 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 GATA5Q9BWX5 397 aaPredicted RBP12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 ROGDIQ9GZN7 287 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 LYRM4Q9HD34 91 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 G3BP2Q9UN86 482 aaKnown RBP12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 SLC12A4Q9UP95 1085 aa12.96□□□□□ -0.33
TSPAN3-205ENST00000558745 A0A0A6YYD5 115 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 GLOD5A6NK44 160 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 RGS16O15492 202 aaPredicted RBP12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 CTNSO60931 367 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 SCELO95171 688 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 WISP1O95388 367 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 KLK1P06870 262 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 TUBBP07437 444 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 HMOX2P30519 316 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 SLC26A5P58743 744 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 DNAJB13P59910 316 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 LCP2Q13094 533 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 PLEKHN1Q494U1 663 aaPredicted RBP12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 BEND6Q5SZJ8 279 aaPredicted RBP12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 IRAK1BP1Q5VVH5 260 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 GPR180Q86V85 440 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 EXOC3L1Q86VI1 746 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 ZNF595Q8IYB9 648 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 CNPY4Q8N129 248 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 AGAP11Q8TF27 550 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 ANKRD9Q96BM1 317 aaPredicted RBP12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 CCDC126Q96EE4 140 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 SMC6Q96SB8 1091 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 SERPINI1Q99574 410 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 LPAR4Q99677 370 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 ALOXE3Q9BYJ1 711 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 IQCGQ9H095 443 aaKnown RBP12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 EPN3Q9H201 632 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 PSD3Q9NYI0 1048 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 C5AR2Q9P296 337 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 SNX6Q9UNH7 406 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 MMACHCQ9Y4U1 282 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 ASB4Q9Y574 426 aa12.95□□□□□ -0.34
TSPAN3-205ENST00000558745 A0A1W2PR48 441 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 CLDN4O14493 209 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 PCDH17O14917 1159 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 PROM1O43490 865 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 TYROBPO43914 113 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 FGF17O60258 216 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 DPM1O60762 260 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 ESRRBO95718 433 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 MLYCDO95822 493 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 CYC1P08574 325 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 FAM58BPP0C7Q3 252 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 TPP2P29144 1249 aaPredicted RBP12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 SOX11P35716 441 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 HSD17B7P56937 341 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 HMGCS1Q01581 520 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 BTKQ06187 659 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 TBL3Q12788 808 aaKnown RBP12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 CFAP157Q5JU67 520 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 LIPMQ5VYY2 423 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 SLC6A19Q695T7 634 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 PLAG1Q6DJT9 500 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 MRM1Q6IN84 353 aaKnown RBP12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 JMJD6Q6NYC1 403 aaPredicted RBP12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 ISLR2Q6UXK2 745 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 ATG14Q6ZNE5 492 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 ZCCHC23Q6ZST2 131 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 FRMD7Q6ZUT3 714 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 ZCCHC7Q8N3Z6 543 aaKnown RBP12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 Q8NA96 180 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 NFAM1Q8NET5 270 aaPredicted RBP12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 MYRIPQ8NFW9 859 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 RDH11Q8TC12 318 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 PPWD1Q96BP3 646 aaKnown RBP12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 NPAS2Q99743 824 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 CENPKQ9BS16 269 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 DDX31Q9H8H2 851 aaKnown RBP12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 KCNK13Q9HB14 408 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms