RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 UNC5DQ6UXZ4 953 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 NCCRP1Q6ZVX7 275 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 MICALCLQ6ZW33 695 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 TMEM200AQ86VY9 491 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 ZNF575Q86XF7 245 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 VRK3Q8IV63 474 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 CDKL3Q8IVW4 592 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 KATNAL2Q8IYT4 538 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 RCOR2Q8IZ40 523 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 SLC22A15Q8IZD6 547 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 OR4N4Q8N0Y3 316 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 MMP21Q8N119 569 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 GHDCQ8N2G8 530 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 TMEM178AQ8NBL3 297 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 FAM98AQ8NCA5 519 aaKnown RBP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 CHDHQ8NE62 594 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 GSDMBQ8TAX9 411 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 AGAP11Q8TF27 550 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 PHF10Q8WUB8 498 aaKnown RBP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 STYXQ8WUJ0 223 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 SNX33Q8WV41 574 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 ASZ1Q8WWH4 475 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 METTL21AQ8WXB1 218 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 SDCCAG3Q96C92 435 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 MVB12AQ96EY5 273 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 MMABQ96EY8 250 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 CDKN2AIPNLQ96HQ2 116 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 ZNF354BQ96LW1 612 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 C10orf90Q96M02 699 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 DCLRE1CQ96SD1 692 aaKnown RBP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 VKORC1Q9BQB6 163 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 UTP23Q9BRU9 249 aaKnown RBP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 HEMGNQ9BXL5 484 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 C10orf88Q9H8K7 445 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 ARNT2Q9HBZ2 717 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 MKKSQ9NPJ1 570 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 KLHL1Q9NR64 748 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 ZNHIT6Q9NWK9 470 aaKnown RBP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 STOX2Q9P2F5 926 aaPredicted RBP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.67□□□□□ -1.5
ZEB1-211ENST00000558440 CHST2Q9Y4C5 530 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 PCDHGB6Q9Y5F9 930 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 ZANQ9Y493 2812 aa5.67□□□□□ -1.5
ZEB1-211ENST00000558440 CSPG4Q6UVK1 2322 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 LOC102723996A0A087X1L8 192 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 ASNA1O43681 348 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 OR1I1O60431 355 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 ITGA10O75578 1167 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 FAM155BO75949 473 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 WISP2O76076 250 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 LPLP06858 475 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 C8orf89P0DMQ9 161 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 TPH1P17752 444 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 PSMB5P28074 263 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 CMPK1P30085 196 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 CCR7P32248 378 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 LGALS4P56470 323 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 GRB7Q14451 532 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 PDCD1Q15116 288 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 OR1C1Q15619 314 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 MEP1AQ16819 746 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 BTBD16Q32M84 506 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 ACER2Q5QJU3 275 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 MFSD4BQ5TF39 518 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 FCRLBQ6BAA4 426 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 DRICH1Q6PGQ1 229 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-211ENST00000558440 DARS2Q6PI48 645 aaKnown RBP5.66□□□□□ -1.5
ZEB1-211ENST00000558440 TMEM205Q6UW68 189 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 C3P1Q6ZMU1 363 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 CLEC17AQ6ZS10 378 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 BBS12Q6ZW61 710 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 RNF44Q7L0R7 432 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 DOLPP1Q86YN1 238 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 BEST3Q8N1M1 668 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 CSNK1A1LQ8N752 337 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 HORMAD2Q8N7B1 307 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 DNAAF3Q8N9W5 541 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 ACBD4Q8NC06 268 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 OR2L3Q8NG85 312 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 SKA2Q8WVK7 121 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-211ENST00000558440 RAD51AP1Q96B01 352 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 IMMP1LQ96LU5 166 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 CCDC42Q96M95 316 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 SPATA13Q96N96 652 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 TREX2Q9BQ50 279 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-211ENST00000558440 ZNF559Q9BR84 538 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 LRRC40Q9H9A6 602 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 KCNK13Q9HB14 408 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 ANKRD10Q9NXR5 420 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 C19orf25Q9UFG5 118 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-211ENST00000558440 KLK4Q9Y5K2 254 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 MRFAP1Q9Y605 127 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 FREM3P0C091 2139 aa5.66□□□□□ -1.5
ZEB1-211ENST00000558440 ATRQ13535 2644 aa5.65□□□□□ -1.5
ZEB1-211ENST00000558440 MXRA5Q9NR99 2828 aa5.65□□□□□ -1.5
ZEB1-211ENST00000558440 A0A0A6YYC8 382 aaPredicted RBP5.65□□□□□ -1.5
ZEB1-211ENST00000558440 CENPVL1A0A0U1RR11 272 aa5.65□□□□□ -1.5
ZEB1-211ENST00000558440 CCDC162PA2VCL2 907 aa5.65□□□□□ -1.5
ZEB1-211ENST00000558440 ASPDHA6ND91 283 aa5.65□□□□□ -1.5
ZEB1-211ENST00000558440 OR51F1A6NGY5 319 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms