RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 KCMF1Q9P0J7 381 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 PTGFRNQ9P2B2 879 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 PHF11Q9UIL8 331 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 ADAM29Q9UKF5 820 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 ICE1Q9Y2F5 2266 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 ABCA12Q86UK0 2595 aa7.96□□□□□ -1.14
TPM1-213ENST00000558400 USP9YO00507 2555 aaPredicted RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 IGKV3D-11A0A0A0MRZ8 115 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 TRAV17A0A0B4J275 112 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 IGHV3-20A0A0C4DH32 117 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 A0A0G2JN53 185 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 OR2W5A6NFC9 320 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 A8MUI8 341 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 MASP2O00187 686 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 DYRK3O43781 588 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 GUCY1B2O75343 617 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 ULK1O75385 1050 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 SEC24DO94855 1032 aaPredicted RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 MYL2P10916 166 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 ITGAMP11215 1152 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 HSD3B1P14060 373 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 CPN2P22792 545 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 HSD3B2P26439 372 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 CERS1P27544 350 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 SOX11P35716 441 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 BUD31P41223 144 aaPredicted RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 CDH13P55290 713 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 PKNOX1P55347 436 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 SLC26A5P58743 744 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 DNAJB13P59910 316 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 RPS13P62277 151 aaKnown RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 ARG2P78540 354 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 SLC18A2Q05940 514 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 ASPHQ12797 758 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 STX4Q12846 297 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 TRAF3Q13114 568 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 SLAMF1Q13291 335 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 MEP1AQ16819 746 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 PLEKHN1Q494U1 663 aaPredicted RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 UNC50Q53HI1 259 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 SLC6A19Q695T7 634 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 RPUSD3Q6P087 351 aaKnown RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 CYP20A1Q6UW02 462 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 ZYG11AQ6WRX3 759 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 LINC00696Q6ZRV3 163 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 ATCAYQ86WG3 371 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 SCUBE1Q8IWY4 988 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 LGI4Q8N135 537 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 MREGQ8N565 214 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 HORMAD2Q8N7B1 307 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 OR4F6Q8NGB9 312 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 SUN3Q8TAQ9 357 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 CPT1CQ8TCG5 803 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 BRIX1Q8TDN6 353 aaKnown RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 ELP5Q8TE02 316 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 DAZLQ92904 295 aaKnown RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 MTFMTQ96DP5 389 aaKnown RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 RBM18Q96H35 190 aaKnown RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 CDK15Q96Q40 435 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 ZNF382Q96SR6 550 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 TMEM109Q9BVC6 243 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 ALOXE3Q9BYJ1 711 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 RBCK1Q9BYM8 510 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 IQCGQ9H095 443 aaKnown RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 EPN3Q9H201 632 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 WDR41Q9HAD4 459 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 ADAP2Q9NPF8 381 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 LYARQ9NX58 379 aaKnown RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 SENP1Q9P0U3 644 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 VTI1BQ9UEU0 232 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 TRPS1Q9UHF7 1281 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 RAB21Q9UL25 225 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 CLCA3PQ9Y6N3 262 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 CACNA1DQ01668 2161 aa7.95□□□□□ -1.14
TPM1-213ENST00000558400 TLN1Q9Y490 2541 aaKnown RBP7.95□□□□□ -1.14
TPM1-213ENST00000558400 FLNCQ14315 2725 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 CNTRLQ7Z7A1 2325 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 ARHGAP10A1A4S6 786 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 SAGE2PA6NJ88 616 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 SMIM23A6NLE4 172 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 C4orf51C9J302 202 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 SAP18O00422 153 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 RTCAO00442 366 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 PLPP1O14494 284 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 PROM1O43490 865 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 PLIN3O60664 434 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 VPS4BO75351 444 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 SH3BGRLO75368 114 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 SORBS2O94875 1100 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 PROCP04070 461 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 IFNA16P05015 189 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 ENO1P06733 434 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 COX7A2P14406 83 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 CPA3P15088 417 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 TNNI3P19429 210 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 MAOAP21397 527 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 HMOX2P30519 316 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 BSGP35613 385 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 CD97P48960 835 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 CLCN2P51788 898 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms