RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SMURF1Q9HCE7 757 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 GOSR2O14653 212 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 SPDEFO95238 335 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 MT-CYBP00156 380 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 CAMLGP49069 296 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 FOXM1Q08050 763 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 SMN1Q16637 294 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ODF4Q2M2E3 257 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 PGAP1Q75T13 922 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 GLB1L2Q8IW92 636 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 SVBPQ8N300 66 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 OR2AJ1Q8NGZ0 328 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 HIST1H2AAQ96QV6 131 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 GAS2L1Q99501 681 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 TREX2Q9BQ50 279 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 BCL7BQ9BQE9 202 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ACBD6Q9BR61 282 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 TMPRSS5Q9H3S3 457 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 IGSF5Q9NSI5 407 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 FBXL4Q9UKA2 621 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 SLC22A14Q9Y267 594 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 MRPS23Q9Y3D9 190 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 TCRBP04435 133 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 NAT2P11245 290 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 CBLP22681 906 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF136P52737 540 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 BTG1P62324 171 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 HMGN3Q15651 99 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 TRIM46Q7Z4K8 759 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 LYSMD2Q8IV50 215 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 NT5C3BQ969T7 300 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ZBTB37Q5TC79 503 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 RPLP0P6Q8NHW5 317 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 MRPS31Q92665 395 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 TMEM175Q9BSA9 504 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 DUSP26Q9BV47 211 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ATP13A1Q9HD20 1204 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 MYO18AQ92614 2054 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 SDHDO14521 159 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 FBXO24O75426 580 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ITGA5P08648 1049 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 CDH5P33151 784 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 CXCR4P61073 352 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 XKR4Q5GH76 650 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 NRROSQ86YC3 692 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 C12orf57Q99622 126 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 MICU1Q9BPX6 476 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ATP13A2Q9NQ11 1180 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 EXOSC1Q9Y3B2 195 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 CFTRP13569 1480 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 FAM171A2A8MVW0 826 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ANKRD28O15084 1053 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 RP2O75695 350 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 OR12D1P0DN82 309 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 NME2P22392 152 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 GALK2Q01415 458 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 CHRFAM7AQ494W8 412 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 SPIN3Q5JUX0 258 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 FBXO47Q5MNV8 452 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 HMGN2P46Q86SG4 172 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 MEX3DQ86XN8 651 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 WDR20Q8TBZ3 569 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 NCOA2Q15596 1464 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 TRBV2A0A0J9YWF9 115 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 CACNB4O00305 520 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 B4GALT4O60513 344 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 FZD7O75084 574 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF25P17030 456 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 AKR1C3P42330 323 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 PAGE3Q5JUK9 113 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 Q6ZPB1 254 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 NSUN5Q96P11 429 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ANKRD60Q9BZ19 345 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 TEX10Q9NXF1 929 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ACSL6Q9UKU0 697 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 CA5AP35218 305 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 FLI1Q01543 452 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 PGM5Q15124 567 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 LRIT3Q3SXY7 679 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 B3GNT7Q8NFL0 401 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 NEIL3Q8TAT5 605 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ELP4Q96EB1 424 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 DCLRE1CQ96SD1 692 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 HTD2P86397 168 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 PRAMEF17Q5VTA0 474 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF585AQ6P3V2 769 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 RHOUQ7L0Q8 258 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 MITD1Q8WV92 249 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 TUBG2Q9NRH3 451 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 SALL1Q9NSC2 1324 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 GLYATL1P3A0A0U1RQE8 302 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 LOC285095A0A1B0GVY8 99 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 CHRNA4P43681 627 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 TCEA2Q15560 299 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 FNDC3BQ53EP0 1204 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 MCATQ8IVS2 390 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 PGLYRP2Q96PD5 576 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 SPHK1Q9NYA1 384 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ADAM18Q9Y3Q7 739 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms