RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 WBP2NLQ6ICG8 309 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 OR6B2Q6IFH4 312 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 FAM122CQ6P4D5 195 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 BHLHB9Q6PI77 547 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 CYP20A1Q6UW02 462 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 PQLC2Q6ZP29 291 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 PXKQ7Z7A4 578 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 CPLX4Q7Z7G2 160 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 PARGQ86W56 976 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 Q8N9G6 341 aaPredicted RBP5.4□□□□□ -1.54
RTF1-204ENST00000558117 TMEM116Q8NCL8 245 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 WFIKKN2Q8TEU8 576 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 BMFQ96LC9 184 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 IL17FQ96PD4 163 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 SYNCQ9H7C4 482 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 ZWILCHQ9H900 591 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 POLD4Q9HCU8 107 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 EIF2B3Q9NR50 452 aaKnown RBP5.4□□□□□ -1.54
RTF1-204ENST00000558117 TXLNGQ9NUQ3 528 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 TMEM30AQ9NV96 361 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 SEPT11Q9NVA2 429 aaKnown RBP5.4□□□□□ -1.54
RTF1-204ENST00000558117 SLC39A1Q9NY26 324 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 SPASTQ9UBP0 616 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 DDX25Q9UHL0 483 aaKnown RBP5.4□□□□□ -1.54
RTF1-204ENST00000558117 LSM7Q9UK45 103 aaKnown RBP5.4□□□□□ -1.54
RTF1-204ENST00000558117 APPL1Q9UKG1 709 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 TTC7AQ9ULT0 858 aaPredicted RBP5.4□□□□□ -1.54
RTF1-204ENST00000558117 TMEM184BQ9Y519 407 aaPredicted RBP5.4□□□□□ -1.54
RTF1-204ENST00000558117 PSAT1Q9Y617 370 aa5.4□□□□□ -1.54
RTF1-204ENST00000558117 HYDINQ4G0P3 5121 aa5.4□□□□□ -1.55
RTF1-204ENST00000558117 CACNA1CQ13936 2221 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 KPNA7A9QM74 516 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 INPP4BO15327 924 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 ZNF432O94892 652 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 REC8O95072 547 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 NKX2-2O95096 273 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 KRT19P08727 400 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 CYP11B2P19099 503 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 PSMA4P25789 261 aaKnown RBP5.39□□□□□ -1.55
RTF1-204ENST00000558117 ANXA13P27216 316 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 PIK3CAP42336 1068 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 PSMD8P48556 350 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 THOP1P52888 689 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 RAD23BP54727 409 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 SNX16P57768 344 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 RPS3AP61247 264 aaKnown RBP5.39□□□□□ -1.55
RTF1-204ENST00000558117 MAMLD1Q13495 774 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 CTF1Q16619 201 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 DPCR1Q3MIW9 517 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 ZNF718Q3SXZ3 478 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 ZNF672Q499Z4 452 aaPredicted RBP5.39□□□□□ -1.55
RTF1-204ENST00000558117 DCAF12Q5T6F0 453 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 JADE1Q6IE81 842 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 PODNL1Q6PEZ8 512 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 XKRXQ6PP77 449 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 CWC27Q6UX04 472 aaKnown RBP5.39□□□□□ -1.55
RTF1-204ENST00000558117 MEX3BQ6ZN04 569 aaKnown RBP5.39□□□□□ -1.55
RTF1-204ENST00000558117 CHST9Q7L1S5 443 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 SATL1Q86VE3 508 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 BMPERQ8N8U9 685 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 OR2AK2Q8NG84 335 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 OR14L1PQ8NHC6 308 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 SECTM1Q8WVN6 248 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 KLK6Q92876 244 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 SMARCE1Q969G3 411 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 FBXO32Q969P5 355 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 SNX21Q969T3 373 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 MYLPFQ96A32 169 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 CCDC43Q96MW1 224 aaKnown RBP5.39□□□□□ -1.55
RTF1-204ENST00000558117 TSPAN18Q96SJ8 248 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 DESI2Q9BSY9 194 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 LRRC61Q9BV99 259 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 NUDT9Q9BW91 350 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 OR10A4Q9H209 315 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 LIME1Q9H400 295 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 AGPAT4Q9NRZ5 378 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 DIAPH3Q9NSV4 1193 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 ZNF224Q9NZL3 707 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 SIX4Q9UIU6 781 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 VDAC3Q9Y277 283 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 TMEM5Q9Y2B1 443 aa5.39□□□□□ -1.55
RTF1-204ENST00000558117 IGHV5-10-1A0A0J9YXX1 117 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 FAM237BA0A1B0GVD1 139 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 TLCD2A6NGC4 264 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 AKR1B15C9JRZ8 316 aaPredicted RBP5.38□□□□□ -1.55
RTF1-204ENST00000558117 ZNF587BE7ETH6 402 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 SLC7A4O43246 635 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 CREG1O75629 220 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 TOM1L1O75674 476 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 STK17BO94768 372 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 PTMAP06454 111 aaKnown RBP5.38□□□□□ -1.55
RTF1-204ENST00000558117 ZNF182P17025 639 aaPredicted RBP5.38□□□□□ -1.55
RTF1-204ENST00000558117 DDX5P17844 614 aaKnown RBP5.38□□□□□ -1.55
RTF1-204ENST00000558117 HNRNPA2B1P22626 353 aaKnown RBP5.38□□□□□ -1.55
RTF1-204ENST00000558117 AKT2P31751 481 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 BSGP35613 385 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 DLSTP36957 453 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 F2RL1P55085 397 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 HNRNPH2P55795 449 aaKnown RBP5.38□□□□□ -1.55
RTF1-204ENST00000558117 TAS2R38P59533 333 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms