RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SDCCAG3Q96C92 435 aa12.66□□□□□ -0.38
SNRPA1-204ENST00000558020 SGCZQ96LD1 299 aa12.66□□□□□ -0.38
SNRPA1-204ENST00000558020 UBXN10Q96LJ8 280 aa12.66□□□□□ -0.38
SNRPA1-204ENST00000558020 DMRTA2Q96SC8 542 aa12.66□□□□□ -0.38
SNRPA1-204ENST00000558020 TMEM79Q9BSE2 394 aa12.66□□□□□ -0.38
SNRPA1-204ENST00000558020 PHACTR1Q9C0D0 580 aa12.66□□□□□ -0.38
SNRPA1-204ENST00000558020 DPH5Q9H2P9 285 aa12.66□□□□□ -0.38
SNRPA1-204ENST00000558020 TP63Q9H3D4 680 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-204ENST00000558020 PRDM7Q9NQW5 492 aa12.66□□□□□ -0.38
SNRPA1-204ENST00000558020 COPS7AQ9UBW8 275 aa12.66□□□□□ -0.38
SNRPA1-204ENST00000558020 UTP11Q9Y3A2 253 aaKnown RBP12.66□□□□□ -0.38
SNRPA1-204ENST00000558020 PKDREJQ9NTG1 2253 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 DCHS2Q6V1P9 2916 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 FAM159BA6NKW6 160 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 CXorf49A8MYA2 514 aaPredicted RBP12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 WISP3O95389 354 aaPredicted RBP12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 CERS1P27544 350 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 PPP2R1BP30154 601 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 TLX1P31314 330 aaPredicted RBP12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 RFC3P40938 356 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 MSH2P43246 934 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 HNRNPFP52597 415 aaKnown RBP12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 GPR85P60893 370 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 PPIAP62937 165 aaKnown RBP12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 CMPK2Q5EBM0 449 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 MED27Q6P2C8 311 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 OPN5Q6U736 354 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 RTL4Q6ZR62 310 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 GK5Q6ZS86 529 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 VN1R5Q7Z5H4 357 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 CCDC91Q7Z6B0 441 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 SLC22A16Q86VW1 577 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 CHERPQ8IWX8 916 aaKnown RBP12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 ACOT4Q8N9L9 421 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 TMEM52Q8NDY8 209 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 SPATA4Q8NEY3 305 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 PTPMT1Q8WUK0 201 aaPredicted RBP12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 ESAMQ96AP7 390 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 CMTM7Q96FZ5 175 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 RBM18Q96H35 190 aaKnown RBP12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 LURAP1Q96LR2 239 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 OR8D2Q9GZM6 311 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 RAB17Q9H0T7 212 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 SMYD2Q9NRG4 433 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 MS4A12Q9NXJ0 267 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 OPTCQ9UBM4 332 aa12.65□□□□□ -0.38
SNRPA1-204ENST00000558020 CCDC189A1A4V9 331 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 SYCE1LA8MT33 242 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 C17orf105B2RV13 164 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 WWP2O00308 870 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 ADAM10O14672 748 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 PDE9AO76083 593 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 PCNAP12004 261 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 EPB42P16452 691 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 CNR1P21554 472 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 HIST1H1TP22492 207 aaPredicted RBP12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 ATP5A1P25705 553 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 STX2P32856 288 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 TBL3Q12788 808 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 ZKSCAN8Q15776 578 aaPredicted RBP12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 FBXO48Q5FWF7 155 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 NDUFAF5Q5TEU4 345 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 ACAD11Q709F0 780 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 FGD2Q7Z6J4 655 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 CD163Q86VB7 1156 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 PPM1NQ8N819 430 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 OR2M7Q8NG81 312 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 RND1Q92730 232 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 EXT2Q93063 718 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 RGMAQ96B86 450 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 C14orf79Q96F83 325 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 RASL10BQ96S79 203 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 FAM173AQ9BQD7 235 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 TRIM8Q9BZR9 551 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 DEFB127Q9H1M4 99 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 ALG9Q9H6U8 611 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 RYDENQ9NUL5 291 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 NUDT4Q9NZJ9 180 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 ZNF223Q9UK11 482 aaPredicted RBP12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 ACOT9Q9Y305 439 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 ANGPTL3Q9Y5C1 460 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 CLDN16Q9Y5I7 305 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 NCOA6Q14686 2063 aaPredicted RBP12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 OTOGQ6ZRI0 2925 aa12.64□□□□□ -0.39
SNRPA1-204ENST00000558020 OR14I1A6ND48 311 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 TMEM200CA6NKL6 621 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 FOXO6A8MYZ6 492 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 SUPT3HB4E1H0 165 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 TGFBR3LH3BV60 316 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 K7EPI3 171 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 FANCGO15287 622 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 ZNHIT1O43257 154 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 SUPT3HO75486 399 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 OR6B1O95007 311 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 TBX6O95947 436 aaPredicted RBP12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 P04436 131 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 LTA4HP09960 611 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 CPN2P22792 545 aa12.63□□□□□ -0.39
SNRPA1-204ENST00000558020 CHRNB4P30926 498 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms