RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 KCMF1Q9P0J7 381 aa13.62□□□□□ -0.23
SHMT2-235ENST00000557740 OPTCQ9UBM4 332 aa13.62□□□□□ -0.23
SHMT2-235ENST00000557740 PPT2Q9UMR5 302 aa13.62□□□□□ -0.23
SHMT2-235ENST00000557740 PKDREJQ9NTG1 2253 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 MYOCOSA0A1B0GUC4 107 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 HS6ST1O60243 411 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 PRKNO60260 465 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-235ENST00000557740 CTNSO60931 367 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 KERAO60938 352 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 FAM155BO75949 473 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 OR2J2O76002 312 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 TPOP07202 933 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 LTA4HP09960 611 aaKnown RBP13.61□□□□□ -0.23
SHMT2-235ENST00000557740 TNNI3P19429 210 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 CRABP2P29373 138 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 SERPINB1P30740 379 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 CASQ1P31415 396 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 PTGS2P35354 604 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 SSR2P43308 183 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 GPR143P51810 404 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 NAB1Q13506 487 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 SERTAD2Q14140 314 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 AP5B1Q2VPB7 878 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 TMEM35AQ53FP2 167 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 MED27Q6P2C8 311 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 FGD2Q7Z6J4 655 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 CD163Q86VB7 1156 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 CHERPQ8IWX8 916 aaKnown RBP13.61□□□□□ -0.23
SHMT2-235ENST00000557740 ZFP62Q8NB50 900 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-235ENST00000557740 MORN4Q8NDC4 146 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 PSD4Q8NDX1 1056 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 FAM57AQ8TBR7 257 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 FBF1Q8TES7 1133 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 UBTD2Q8WUN7 234 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 SREK1Q8WXA9 508 aaKnown RBP13.61□□□□□ -0.23
SHMT2-235ENST00000557740 MTFMTQ96DP5 389 aaKnown RBP13.61□□□□□ -0.23
SHMT2-235ENST00000557740 MAPKAP1Q9BPZ7 522 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 MS4A8Q9BY19 250 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 OR8D2Q9GZM6 311 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 PRDM7Q9NQW5 492 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 MYOTQ9UBF9 498 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 COPS7AQ9UBW8 275 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 ASB1Q9Y576 335 aa13.61□□□□□ -0.23
SHMT2-235ENST00000557740 A0A1B0GTH9 108 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 C17orf105B2RV13 164 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 UBXN8O00124 270 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 LDB3O75112 727 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 SH3BGRLO75368 114 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 OR6B1O95007 311 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 C1QAP02745 245 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 SLC35E2BP0CK96 405 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 COX7A2P14406 83 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 EPORP19235 508 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 ATP5A1P25705 553 aaKnown RBP13.6□□□□□ -0.23
SHMT2-235ENST00000557740 GMPRP36959 345 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 CASP2P42575 452 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 MAGEA4P43358 317 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 RAP1GDS1P52306 607 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 PLGLB1Q02325 96 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 CMPK2Q5EBM0 449 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 ZNF793Q6ZN11 406 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 C16orf47Q6ZP98 133 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-235ENST00000557740 CHSY3Q70JA7 882 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 UBE3DQ7Z6J8 389 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 MYLK4Q86YV6 388 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-235ENST00000557740 ACOT4Q8N9L9 421 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 FBXO25Q8TCJ0 367 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 ZNF473Q8WTR7 871 aaKnown RBP13.6□□□□□ -0.23
SHMT2-235ENST00000557740 PTPMT1Q8WUK0 201 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-235ENST00000557740 RASL10BQ96S79 203 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 DMRTA2Q96SC8 542 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 CENPKQ9BS16 269 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 LIN28AQ9H9Z2 209 aaKnown RBP13.6□□□□□ -0.23
SHMT2-235ENST00000557740 VTI1BQ9UEU0 232 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 ANGPTL3Q9Y5C1 460 aa13.6□□□□□ -0.23
SHMT2-235ENST00000557740 SYCE1LA8MT33 242 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 K7EPI3 171 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 ACOT7O00154 380 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 WWP2O00308 870 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 SAP18O00422 153 aaKnown RBP13.59□□□□□ -0.23
SHMT2-235ENST00000557740 RTCAO00442 366 aaKnown RBP13.59□□□□□ -0.23
SHMT2-235ENST00000557740 TGFB1P01137 390 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 EPB42P16452 691 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 HIST1H1TP22492 207 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-235ENST00000557740 CPN2P22792 545 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 SOX3P41225 446 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 ID2Q02363 134 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 DLG1Q12959 904 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 DDX39BQ13838 428 aaKnown RBP13.59□□□□□ -0.23
SHMT2-235ENST00000557740 CDSNQ15517 529 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 KHDRBS2Q5VWX1 349 aaKnown RBP13.59□□□□□ -0.23
SHMT2-235ENST00000557740 ARHGAP11AQ6P4F7 1023 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 IL20RBQ6UXL0 311 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 ISCA2Q86U28 154 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 LAS2Q8IYD9 372 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 C7orf57Q8NEG2 295 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 OR7G3Q8NG95 312 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 C16orf52Q8NHV5 167 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 SLC2A12Q8TD20 617 aa13.59□□□□□ -0.23
SHMT2-235ENST00000557740 CA5BP1Q8WTZ4 195 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms