RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 OR6C74A6NCV1 312 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 KBTBD13C9JR72 458 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 H3BQV1 296 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 SLC33A1O00400 549 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 IKBKBO14920 756 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 XPO1O14980 1071 aaKnown RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 MGRN1O60291 552 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 DDHD2O94830 711 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 MOCS3O95396 460 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 PDGFBP01127 241 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 POU2F1P14859 743 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 VCLP18206 1134 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 DNASE1P24855 282 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 RDXP35241 583 aaKnown RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 RANBP1P43487 201 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 CCR4P51679 360 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 PRELPP51888 382 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 ADARP55265 1226 aaKnown RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 S100A12P80511 92 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 YWHAHQ04917 246 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 LIPEQ05469 1076 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 SPAG1Q07617 926 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 ACTN3Q08043 901 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 ITGA9Q13797 1035 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 TAB1Q15750 504 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 RBBP7Q16576 425 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 LRIT3Q3SXY7 679 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 WDR38Q5JTN6 314 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 DCAF10Q5QP82 559 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 C1orf185Q5T7R7 199 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 LIN9Q5TKA1 542 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 FAM53AQ6NSI3 398 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 BTNL8Q6UX41 500 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 RBMS3Q6XE24 437 aaKnown RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 PPP1R21Q6ZMI0 780 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 CYP4V2Q6ZWL3 525 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 ANKRD46Q86W74 232 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 AMIGO1Q86WK6 493 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 MEX3DQ86XN8 651 aaKnown RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 CCDC170Q8IYT3 715 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 FBXW8Q8N3Y1 598 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 MRPL43Q8N983 215 aaKnown RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 KBTBD3Q8NAB2 608 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 DBF4BQ8NFT6 615 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 UBA3Q8TBC4 463 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 CCDC110Q8TBZ0 833 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 HEXDCQ8WVB3 486 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 MRPS27Q92552 414 aaKnown RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 PIK3R3Q92569 461 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 SYN2Q92777 582 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 ATP6V1E2Q96A05 226 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 PGM2Q96G03 612 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 VPS39Q96JC1 886 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 PRICKLE1Q96MT3 831 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF558Q96NG5 402 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 TXN2Q99757 166 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 NFKBIZQ9BYH8 718 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 OR2B2Q9GZK3 357 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 FNDC4Q9H6D8 234 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 MAGEF1Q9HAY2 307 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 SIX2Q9NPC8 291 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 DDX43Q9NXZ2 648 aaKnown RBP1.52□□□□□ -2.17
HIF1A-212ENST00000557538 WWOXQ9NZC7 414 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 DNAJB9Q9UBS3 223 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 TRIM10Q9UDY6 481 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 CD300AQ9UGN4 299 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 UBQLN2Q9UHD9 624 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 PSME2Q9UL46 239 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 STUB1Q9UNE7 303 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 EXOC7Q9UPT5 735 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 ACOT9Q9Y305 439 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 ROCK2O75116 1388 aaKnown RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MAP3K5Q99683 1374 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 GAPVD1Q14C86 1478 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 IFT140Q96RY7 1462 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 TRAV34A0A0B4J273 112 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 A0A0G2JLW4 131 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 C13orf42A0A1B0GVH6 325 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 C15orf61A6NNL5 157 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 PMS2P5A8MQ11 134 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 E2F3O00716 465 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF197O14709 1029 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MEIS2O14770 477 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 PI15O43692 258 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CIAO1O76071 339 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ERLIN2O94905 339 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 SNAPINO95295 136 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 BAG3O95817 575 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 PNPP00491 289 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CRYAAP02489 173 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 SMIM18P0DKX4 95 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 FCARP24071 287 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MSNP26038 577 aaKnown RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MAGEA11P43364 429 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 OR3A1P47881 315 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MTCP1P56278 107 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 KIAA1024LP59773 190 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 GNB1P62873 340 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MYL7Q01449 175 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MZT1Q08AG7 82 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms