RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SLC9B1P1A6NJY1 282 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 PROM1O43490 865 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 SRPX2O60687 465 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-233ENST00000557529 AIFM1O95831 613 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 NTRK1P04629 796 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 CAPNS1P04632 268 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 EIF2S1P05198 315 aaKnown RBP11.82□□□□□ -0.52
SHMT2-233ENST00000557529 NR2F6P10588 404 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 IL1RNP18510 177 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 FASP25445 335 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 PEX2P28328 305 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 CNR2P34972 360 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 SOAT1P35610 550 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 BUD31P41223 144 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-233ENST00000557529 PPM1FP49593 454 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-233ENST00000557529 CHRNB3Q05901 458 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 RBBP4Q09028 425 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 VEZF1Q14119 521 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 TAF11Q15544 211 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 GRAMD1BQ3KR37 738 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 CMPK2Q5EBM0 449 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 LPCAT4Q643R3 524 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 TMEM214Q6NUQ4 689 aaKnown RBP11.82□□□□□ -0.52
SHMT2-233ENST00000557529 SLC48A1Q6P1K1 146 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 ANGPTL8Q6UXH0 198 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 IZUMO2Q6UXV1 221 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 ZNF551Q7Z340 670 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-233ENST00000557529 RABEPKQ7Z6M1 372 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 SAMD14Q8IZD0 417 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-233ENST00000557529 MAML2Q8IZL2 1156 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-233ENST00000557529 CARFQ8N187 725 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 C10orf111Q8N326 155 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 SLC25A45Q8N413 288 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 PSMA8Q8TAA3 256 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 LRTOMTQ8WZ04 291 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 ZDHHC12Q96GR4 267 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 ZC3H10Q96K80 434 aaKnown RBP11.82□□□□□ -0.52
SHMT2-233ENST00000557529 BBS4Q96RK4 519 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 CHRNA10Q9GZZ6 450 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 CHST8Q9H2A9 424 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 VCXQ9H320 206 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 CXorf36Q9H7Y0 433 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 IL21RQ9HBE5 538 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 DCAF13Q9NV06 445 aaKnown RBP11.82□□□□□ -0.52
SHMT2-233ENST00000557529 LRIT1Q9P2V4 623 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 ENTPD4Q9Y227 616 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 DTNAQ9Y4J8 743 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 SLC22A7Q9Y694 548 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 RNF215Q9Y6U7 377 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 SPACA6W5XKT8 324 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 CACNA1IQ9P0X4 2223 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 THADAQ6YHU6 1953 aa11.82□□□□□ -0.52
SHMT2-233ENST00000557529 RNF103-CHMP3A0A140T963 221 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 MYO1GB0I1T2 1018 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 YKT6O15498 198 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 PRAMEF10O60809 474 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 TIPRLO75663 272 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 RAP2AP10114 183 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 BMP2P12643 396 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 ACADSP16219 412 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 GLB1P16278 677 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 TLX1P31314 330 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-233ENST00000557529 PCGF2P35227 344 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 HOXD12P35452 270 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 CRATP43155 626 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 GPR3P46089 330 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 VSX2P58304 361 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-233ENST00000557529 SKP1P63208 163 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 BNC1Q01954 994 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 BNIP3Q12983 259 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 SRSF5Q13243 272 aaKnown RBP11.81□□□□□ -0.52
SHMT2-233ENST00000557529 SPDYE7PQ495Y7 208 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 DEFB134Q4QY38 66 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.81□□□□□ -0.52
SHMT2-233ENST00000557529 GCNT6Q5T4J0 391 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 PEAR1Q5VY43 1037 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-233ENST00000557529 CEP68Q76N32 757 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 PTOV1Q86YD1 416 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 MCATQ8IVS2 390 aaKnown RBP11.81□□□□□ -0.52
SHMT2-233ENST00000557529 SLC30A8Q8IWU4 369 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 DNAJC22Q8N4W6 341 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 DTWD2Q8NBA8 298 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 C11orf65Q8NCR3 313 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 PNPT1Q8TCS8 783 aaKnown RBP11.81□□□□□ -0.52
SHMT2-233ENST00000557529 NETO1Q8TDF5 533 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 NEURL3Q96EH8 262 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 AHCYL2Q96HN2 611 aaKnown RBP11.81□□□□□ -0.52
SHMT2-233ENST00000557529 MAP3K3Q99759 626 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 MAPKAP1Q9BPZ7 522 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 DUSP23Q9BVJ7 150 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 TRIM4Q9C037 500 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 EPS8L2Q9H6S3 715 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 MAGIXQ9H6Y5 334 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 LYRM4Q9HD34 91 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 SLAMF7Q9NQ25 335 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 AGPAT4Q9NRZ5 378 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 SEMA3GQ9NS98 782 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 TMEM74BQ9NUR3 256 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 NLGN3Q9NZ94 848 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 C5AR2Q9P296 337 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms