RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 C6orf47O95873 294 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 GASTP01350 101 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 YES1P07947 543 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 SRCP12931 536 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 SELPP16109 830 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 CRYBB2P43320 205 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 SMIM11AP58511 58 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 OCLNQ16625 522 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 ZNF385BQ569K4 471 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.56■□□□□ 0.08
SHMT2-232ENST00000557487 C22orf39Q6P5X5 142 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 HSDL2Q6YN16 418 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 GALNT12Q8IXK2 581 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 C7orf61Q8IZ16 206 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 NATD1Q8N6N6 113 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 FBXO15Q8NCQ5 510 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-232ENST00000557487 OR8J1Q8NGP2 316 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 BCL7CQ8WUZ0 217 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-232ENST00000557487 VOPP1Q96AW1 172 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 TMEM159Q96B96 161 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 PPP1R16AQ96I34 528 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 TEFMQ96QE5 360 aaKnown RBP15.56■□□□□ 0.08
SHMT2-232ENST00000557487 TAS2R16Q9NYV7 291 aa15.56■□□□□ 0.08
SHMT2-232ENST00000557487 CYP2A6P11509 494 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 DDX5P17844 614 aaKnown RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 CXCR2P25025 360 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 GATMP50440 423 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 RPS13P62277 151 aaKnown RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 TLE2Q04725 743 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 SYTL3Q4VX76 610 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 NXNL2Q5VZ03 156 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 C12orf73Q69YU5 71 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 KIAA1841Q6NSI8 718 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 SERPINA13PQ6UXR4 307 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 SLCO4C1Q6ZQN7 724 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 RAVER1Q8IY67 606 aaKnown RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 NANOGP1Q8N7R0 232 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 GPR151Q8TDV0 419 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 BTN2A2Q8WVV5 523 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 MED8Q96G25 268 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 MSLNLQ96KJ4 702 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 FOPNLQ96NB1 174 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 OR4K3Q96R72 315 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 BARHL1Q9BZE3 327 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 B4GALT6Q9UBX8 382 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 CCDC182A6NF36 153 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 FAAHO00519 579 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 SSX4O60224 188 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 ENTPD6O75354 484 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 TRIM3O75382 744 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 CSO75390 466 aaKnown RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 PDE9AO76083 593 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 RB1P06400 928 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 RPL17P18621 184 aaKnown RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 UQCRC2P22695 453 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 MLLT3P42568 568 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 LARS2Q15031 903 aaKnown RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 SLC25A30Q5SVS4 291 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 PRPF38BQ5VTL8 546 aaKnown RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 FAM71E1Q6IPT2 247 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 REEP3Q6NUK4 255 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 CASP12Q6UXS9 341 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 ZNF852Q6ZMS4 543 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 HTR3DQ70Z44 454 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 DNAJB7Q7Z6W7 309 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 RDH10Q8IZV5 341 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 VWA5B2Q8N398 1253 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 TRAM1L1Q8N609 369 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 OR4K1Q8NGD4 311 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 SLC25A46Q96AG3 418 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 DHRS1Q96LJ7 313 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 MED18Q9BUE0 208 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 WRAP53Q9BUR4 548 aaKnown RBP15.55■□□□□ 0.08
SHMT2-232ENST00000557487 FAM83DQ9H4H8 585 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 MARCH7Q9H992 704 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 MUTYHQ9UIF7 546 aa15.55■□□□□ 0.08
SHMT2-232ENST00000557487 IRGMA1A4Y4 181 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 J3KTA2 159 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 ALPPP05187 535 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 POU2F1P14859 743 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 EPHB3P54753 998 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 DSTNP60981 165 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 ALDH6A1Q02252 535 aaKnown RBP15.54■□□□□ 0.08
SHMT2-232ENST00000557487 CHRNEQ04844 493 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 SF1Q15637 639 aaKnown RBP15.54■□□□□ 0.08
SHMT2-232ENST00000557487 ZNF79Q15937 498 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 TBRG1Q3YBR2 411 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 GLYR1Q49A26 553 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-232ENST00000557487 MFSD4BQ5TF39 518 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 HIST2H2AA3Q6FI13 130 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 COMMD6Q7Z4G1 85 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 TMEM150AQ86TG1 271 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 SLC34A3Q8N130 599 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 PSD4Q8NDX1 1056 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 GPR156Q8NFN8 814 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 SLC7A6Q92536 515 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 AP3S1Q92572 193 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 PDXPQ96GD0 296 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 RIPOR3Q96MK2 946 aa15.54■□□□□ 0.08
SHMT2-232ENST00000557487 TRAF4Q9BUZ4 470 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms