RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 NXT1Q9UKK6 140 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 CD6P30203 668 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 TIA1P31483 386 aaKnown RBP eCLIP8.04□□□□□ -1.12
CHD8-213ENST00000557364 FMO3P31513 532 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 HMGCLP35914 325 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 CHRNA4P43681 627 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 E2F1Q01094 437 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 CBARPQ8N350 705 aaPredicted RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 CBR4Q8N4T8 237 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 MINDY2Q8NBR6 621 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 CIB1Q99828 191 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 ACTR3BQ9P1U1 418 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 DISC1C4P0D8 188 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 PRH1P02810 166 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 DDCP20711 480 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 FPR1P21462 350 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 UGT2B10P36537 528 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 ETV3P41162 512 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 CA9Q16790 459 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 ZNF829Q3KNS6 432 aaPredicted RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 LINGO2Q7L985 606 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 DCBLD1Q8N8Z6 715 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 SMG8Q8ND04 991 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 TMIEQ8NEW7 156 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 OR8J3Q8NGG0 315 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 FAM110BQ8TC76 370 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 HOXB13Q92826 284 aaPredicted RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 OR1F2PQ96R84 312 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 URM1Q9BTM9 101 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 AKTIPQ9H8T0 292 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 TM9SF3Q9HD45 589 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 CLEC4AQ9UMR7 237 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 SH3D21A4FU49 640 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 ZNF821O75541 412 aaPredicted RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 SLURP2P0DP57 97 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 SPINT3P49223 89 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 OR2B6P58173 313 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 ARG2P78540 354 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 ARHGAP11AQ6P4F7 1023 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 CHERPQ8IWX8 916 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 IL17RCQ8NAC3 791 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 PSD4Q8NDX1 1056 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 CENPOQ9BU64 300 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 CADM1Q9BY67 442 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 SIX2Q9NPC8 291 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 CFAP20Q9Y6A4 193 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 RGPD2P0DJD1 1756 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 DDX60Q8IY21 1712 aaKnown RBP8.04□□□□□ -1.12
CHD8-213ENST00000557364 LOC730098B7Z3J9 87 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 OTX2P32243 289 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 OR12D2P58182 307 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 RAB8AP61006 207 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 ZNF627Q7L945 461 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 JAGN1Q8N5M9 183 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 OR5M3Q8NGP4 307 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 THEM6Q8WUY1 208 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 TANKQ92844 425 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 OR52B2Q96RD2 323 aa8.04□□□□□ -1.12
CHD8-213ENST00000557364 BLOC1S5-TXNDC5H3BN57 136 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 H7BY64 318 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 MC3RP41968 323 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 GRIA1P42261 906 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 GATMP50440 423 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 SLAMF1Q13291 335 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 TIGD6Q17RP2 521 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 TLDC1Q6P9B6 456 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 TUBA3EQ6PEY2 450 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 LANCL3Q6ZV70 420 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 AKAP14Q86UN6 197 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 PRAP1Q96NZ9 151 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 NECAB3Q96P71 396 aaPredicted RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 CPEB1Q9BZB8 566 aaKnown RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 OR10A4Q9H209 315 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 TPK1Q9H3S4 243 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 IL21RQ9HBE5 538 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 ACSS2Q9NR19 701 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 KCNIP1Q9NZI2 227 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 TEX264Q9Y6I9 313 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 BHMG1C9JSJ3 638 aaPredicted RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 FAM227AF5H4B4 570 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 H3BNC9 293 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 M0R2N6 131 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 MTX2O75431 263 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 CD46P15529 392 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 DAG1Q14118 895 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 TMEM201Q5SNT2 666 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 ATG9BQ674R7 924 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 TMEM53Q6P2H8 277 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 TTLL10Q6ZVT0 673 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 MAMDC2Q7Z304 686 aaPredicted RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 SLC51AQ86UW1 340 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 SPTSSAQ969W0 71 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 RFT1Q96AA3 541 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 SCRN2Q96FV2 425 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 SERINC2Q96SA4 455 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 CDH20Q9HBT6 801 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 KCNIP3Q9Y2W7 256 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 LOC102723532A0A0G2JNH3 316 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 TPST2O60704 377 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 LSM3P62310 102 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms