RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 MAPK9P45984 424 aa14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 ZNF829Q3KNS6 432 aaPredicted RBP14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 METTL2BQ6P1Q9 378 aaKnown RBP14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 OR8H2Q8N162 312 aa14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 LCN9Q8WX39 176 aa14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 DPH7Q9BTV6 452 aa14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 DCSTAMPQ9H295 470 aa14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 GIMAP4Q9NUV9 329 aa14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 NDUFAF4Q9P032 175 aa14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 SERGEFQ9UGK8 458 aa14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 LYVE1Q9Y5Y7 322 aa14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 PCM1Q15154 2024 aa14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 MAP1BP46821 2468 aaKnown RBP14.63□□□□□ -0.07
TMEM55B-207ENST00000557041 GPR37L1O60883 481 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 AZGP1P25311 298 aaKnown RBP14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 PSMA3P25788 255 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 RPL3P39023 403 aaKnown RBP14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 ACTR1BP42025 376 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 ACTR1AP61163 376 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 CDK3Q00526 305 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 MAD2L1BPQ15013 274 aaPredicted RBP14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 CST6Q15828 149 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 DEPDC1Q5TB30 811 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 BTLAQ7Z6A9 289 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 FRMD1Q8N878 549 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 MYDGFQ969H8 173 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 LGALS12Q96DT0 336 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 ZDHHC5Q9C0B5 715 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 SPATA7Q9P0W8 599 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 FURINP09958 794 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 DCKP27707 260 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 GJA4P35212 333 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 TMBIM6P55061 237 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 SYPL1Q16563 259 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 REEP3Q6NUK4 255 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 USP51Q70EK9 711 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 NUDT13Q86X67 352 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 KRT73Q86Y46 540 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 CENPSQ8N2Z9 138 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 CHCHD4Q8N4Q1 142 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 HORMAD2Q8N7B1 307 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 KCT2Q8NC54 265 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.62□□□□□ -0.072e-14■■■■■ 67.4
TMEM55B-207ENST00000557041 GEMIN6Q8WXD5 167 aaKnown RBP14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 CXorf40BQ96DE9 158 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 ZBED6CLQ96FA7 236 aaPredicted RBP14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 ART5Q96L15 291 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 NUAK2Q9H093 628 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 POLR2J3Q9H1A7 115 aaKnown RBP14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 ZBTB20Q9HC78 741 aaPredicted RBP14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 PRSS16Q9NQE7 514 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 TMEM45AQ9NWC5 275 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 PPIL1Q9Y3C6 166 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 SCN2AQ99250 2005 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 UGDHO60701 494 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 UGT2B17O75795 530 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 SERPINI2O75830 405 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 CAPNS1P04632 268 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 HNRNPA1P09651 372 aaKnown RBP eCLIP14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 C16orf62Q7Z3J2 963 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 CALHM3Q86XJ0 350 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 ZNF761Q86XN6 746 aaPredicted RBP14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 POC5Q8NA72 575 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 OR52N2Q8NGI0 321 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 QRFPRQ96P65 431 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 CSF3RQ99062 836 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 EHD1Q9H4M9 534 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 RNF167Q9H6Y7 350 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 BRF2Q9HAW0 419 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 DNAAF2Q9NVR5 837 aaKnown RBP14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 CLN6Q9NWW5 311 aa14.62□□□□□ -0.07
TMEM55B-207ENST00000557041 PLPP1O14494 284 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 HSD3B1P14060 373 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 HSD3B2P26439 372 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 MVKQ03426 396 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 AQP6Q13520 282 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 CAMK1Q14012 370 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 ARMCX4Q5H9R4 360 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 KHDRBS2Q5VWX1 349 aaKnown RBP14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 XAF1Q6GPH4 301 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 PNCKQ6P2M8 343 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 TRIM73Q86UV7 250 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 TCEANCQ8N8B7 351 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 AMER3Q8N944 861 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 OR2L2Q8NH16 312 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 FNDC8Q8TC99 324 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 TSACCQ96A04 125 aaPredicted RBP14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 RGMAQ96B86 450 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 ZNF300Q96RE9 604 aaPredicted RBP14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 RPP25Q9BUL9 199 aaKnown RBP14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 SLC28A3Q9HAS3 691 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 NEUROG3Q9Y4Z2 214 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 PCDHGA10Q9Y5H3 936 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 TRBV5-3A0A0A0MS03 114 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 CAPN5O15484 640 aaPredicted RBP14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 CCDC159P0C7I6 412 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 CD72P21854 359 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 PTPN6P29350 595 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 CNR2P34972 360 aa14.61□□□□□ -0.07
TMEM55B-207ENST00000557041 GP2P55259 537 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms