RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 CMTM7Q96FZ5 175 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 COX14Q96I36 57 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 RSRC1Q96IZ7 334 aaKnown RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 MSLNLQ96KJ4 702 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 LRGUKQ96M69 825 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 FRG2BQ96QU4 278 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 PKP4Q99569 1192 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 GABRG3Q99928 467 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 GPATCH1Q9BRR8 931 aaKnown RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 RPP25Q9BUL9 199 aaKnown RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 EFHD1Q9BUP0 239 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 SLC17A9Q9BYT1 436 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 PCBD2Q9H0N5 130 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 MUC13Q9H3R2 512 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 EHD1Q9H4M9 534 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 RMI1Q9H9A7 625 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 SLC52A3Q9NQ40 469 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 ITM2CQ9NQX7 267 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 PHPT1Q9NRX4 125 aaPredicted RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 FBXL12Q9NXK8 326 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 C6orf203Q9P0P8 240 aaPredicted RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 KLQ9UEF7 1012 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 CD300AQ9UGN4 299 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 MAPRE3Q9UPY8 281 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 SLC22A14Q9Y267 594 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 C15orf41Q9Y2V0 281 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 TMEM98Q9Y2Y6 226 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 PTGDR2Q9Y5Y4 395 aa4.28□□□□□ -1.72
SRP54-212ENST00000556992 TDRD15B5MCY1 1934 aaKnown RBP4.28□□□□□ -1.72
SRP54-212ENST00000556992 DCHS1Q96JQ0 3298 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 KCNE1BA0A087WTH5 132 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D3DA0A087WVF3 549 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D3IA0A087WXS9 549 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D3EA0A087X179 549 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D3KA0A087X1G2 549 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D3FA6NER0 549 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 TMEM202A6NGA9 273 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 AQP12BA6NM10 295 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 ARHGEF33A8MVX0 844 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 B5MCH6 92 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D3LB9A6J9 549 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 FOXE1O00358 373 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 PLK4O00444 970 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 ANKRD28O15084 1053 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 MID1O15344 667 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 KDM1AO60341 852 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 GMNNO75496 209 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 KLF8O95600 359 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 SLC16A8O95907 504 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 PAK4O96013 591 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 PDYNP01213 254 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CFIP05156 583 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D3HP0C7X1 549 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 C1GALT1C1LP0DN25 315 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 ACADMP11310 421 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 BCKDHAP12694 445 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 HSD17B1P14061 328 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CD1EP15812 388 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 NPPBP16860 134 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 HOXB6P17509 224 aaKnown RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 XRCC1P18887 633 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 EPORP19235 508 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CAPN3P20807 821 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 PRPS1L1P21108 318 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 IL10P22301 178 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 SLC6A2P23975 617 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CXCR2P25025 360 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 ACADLP28330 430 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 PDHA2P29803 388 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 DRD3P35462 400 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 NEK2P51955 445 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 THOP1P52888 689 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 METAP1P53582 386 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CLNS1AP54105 237 aaKnown RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 CLDN8P56748 225 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 EEFSECP57772 596 aaKnown RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 TAS2R38P59533 333 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CDK3Q00526 305 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 MS4A2Q01362 244 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 RHDQ02161 417 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 LRRC74AQ0VAA2 488 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CSTF3Q12996 717 aaKnown RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 DOC2AQ14183 400 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 ZNF169Q14929 603 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 TAF11Q15544 211 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 MAPKAPK3Q16644 382 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 AAK1Q2M2I8 961 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 MUM1Q2TAK8 710 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 FBXO43Q4G163 708 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TMEM196Q5HYL7 178 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 EOGTQ5NDL2 527 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TCHHL1Q5QJ38 904 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 B3GNTL1Q67FW5 361 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D3GQ6DHY5 549 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D3CQ6IPX1 549 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 MED27Q6P2C8 311 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 MBOAT1Q6ZNC8 495 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 LRRC74BQ6ZQY2 392 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 LRRTM4Q86VH4 590 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 SPATA24Q86W54 205 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms