RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ING2Q9H160 280 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 TUBB1Q9H4B7 451 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 NECTIN3Q9NQS3 549 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 PRDM9Q9NQV7 894 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 PRTFDC1Q9NRG1 225 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 NMRK1Q9NWW6 199 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 ATG4BQ9Y4P1 393 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 DNAJC15Q9Y5T4 150 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 SPACA6W5XKT8 324 aa16.44■□□□□ 0.22
SHMT2-225ENST00000556798 PIEZO2Q9H5I5 2752 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 ARHGAP10A1A4S6 786 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 TGFBR3LH3BV60 316 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 CHEK2O96017 543 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 CYC1P08574 325 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 FGF4P08620 206 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 FAM58BPP0C7Q3 252 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 FAM87AP0C7U9 286 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 GRK2P25098 689 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 SLC1A6P48664 564 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 POLE2P56282 527 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 TNFRSF17Q02223 184 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 SLC13A2Q13183 592 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 STX3Q13277 289 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 PCOLCEQ15113 449 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 SPDYAQ5MJ70 313 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 DCAF10Q5QP82 559 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 CCNYL2Q5T2Q4 361 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 MRM1Q6IN84 353 aaKnown RBP16.43■□□□□ 0.22
SHMT2-225ENST00000556798 PAGE2Q7Z2X7 111 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 TRIM46Q7Z4K8 759 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 CLYBLQ8N0X4 340 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 ZNF781Q8N8C0 355 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 CHTF18Q8WVB6 975 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 NACC2Q96BF6 587 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 SORT1Q99523 831 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 ARHGAP9Q9BRR9 750 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 EBPLQ9BY08 206 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 ZNF160Q9HCG1 818 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 LYARQ9NX58 379 aaKnown RBP16.43■□□□□ 0.22
SHMT2-225ENST00000556798 TEX10Q9NXF1 929 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-225ENST00000556798 PHF11Q9UIL8 331 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 ADAM29Q9UKF5 820 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 MRPS33Q9Y291 106 aaKnown RBP16.43■□□□□ 0.22
SHMT2-225ENST00000556798 ASB4Q9Y574 426 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 IGSF10Q6WRI0 2623 aa16.43■□□□□ 0.22
SHMT2-225ENST00000556798 LOC102723996A0A087X1L8 192 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 IGKV3D-11A0A0A0MRZ8 115 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 IGHV1-45A0A0A0MS14 117 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 MYOCOSA0A1B0GUC4 107 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 A0A1W2PR48 441 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 SERTM1A2A2V5 107 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 PIP5K1BO14986 540 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 SKAP2O75563 359 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-225ENST00000556798 SEC24DO94855 1032 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-225ENST00000556798 LINC00032P0C843 101 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 MAPK12P53778 367 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 RRADP55042 308 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 RAE1P78406 368 aaKnown RBP16.42■□□□□ 0.22
SHMT2-225ENST00000556798 ID2Q02363 134 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 ACSM2AQ08AH3 577 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 UGT3A2Q3SY77 523 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 SFT2D3Q587I9 215 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 ACSM2BQ68CK6 577 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 PCSK4Q6UW60 755 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 RIPOR1Q6ZS17 1223 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 MED25Q71SY5 747 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 CPEB2Q7Z5Q1 589 aaKnown RBP16.42■□□□□ 0.22
SHMT2-225ENST00000556798 APLFQ8IW19 511 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-225ENST00000556798 SCUBE1Q8IWY4 988 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 DDIASQ8IXT1 998 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 ZNF595Q8IYB9 648 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 TMEM102Q8N9M5 508 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-225ENST00000556798 OR2T11Q8NH01 316 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 UCN3Q969E3 161 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 FER1L6-AS2Q96M78 137 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 C19orf25Q9UFG5 118 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-225ENST00000556798 MMACHCQ9Y4U1 282 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 CCL27Q9Y4X3 112 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 CLDN16Q9Y5I7 305 aa16.42■□□□□ 0.22
SHMT2-225ENST00000556798 NSG1A0A0A6YYJ2 146 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 TCRBV16S1A1N1A0A5B0 115 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 GLOD5A6NK44 160 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 A6NL46 340 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 ERVH48-1M5A8F1 160 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 CLDN4O14493 209 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 PROM1O43490 865 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 PCDH7O60245 1069 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 LDB3O75112 727 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 RSL1D1O76021 490 aaKnown RBP16.41■□□□□ 0.22
SHMT2-225ENST00000556798 AIFM1O95831 613 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 HPP00738 406 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 CELA2AP08217 269 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 NR2F6P10588 404 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 PPP2R1BP30154 601 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 BUD31P41223 144 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-225ENST00000556798 CCL11P51671 97 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 HSD17B7P56937 341 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 PPP2R2AP63151 447 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 RAPSNQ13702 412 aa16.41■□□□□ 0.22
SHMT2-225ENST00000556798 SPIN4Q56A73 249 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms