RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ZNF10P21506 573 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 HIST1H1TP22492 207 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 ATP5A1P25705 553 aaKnown RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 TPP2P29144 1249 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 GPR143P51810 404 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 HSD17B7P56937 341 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 PMP22Q01453 160 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 ACTN3Q08043 901 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 GTF2H2Q13888 395 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 HIST2H2ACQ16777 129 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 MEP1AQ16819 746 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 TMEM35AQ53FP2 167 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF468Q5VIY5 522 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 KHDRBS2Q5VWX1 349 aaKnown RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 HIST2H2AA3Q6FI13 130 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 GTF2H2CQ6P1K8 395 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 KLC3Q6P597 504 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF227Q86WZ6 799 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF595Q8IYB9 648 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 C4orf33Q8N1A6 199 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 SLC5A8Q8N695 610 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 BCORP1Q8N888 145 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 PTGR2Q8N8N7 351 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 HUS1BQ8NHY5 278 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 FAM76AQ8TAV0 307 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 PRR7Q8TB68 274 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 WDR20Q8TBZ3 569 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 SSC4DQ8WTU2 575 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 NR4A3Q92570 626 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 UBE2E3Q969T4 207 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 SCMH1Q96GD3 660 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 MAPKAP1Q9BPZ7 522 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 TBCDQ9BTW9 1192 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 SORBS1Q9BX66 1292 aaKnown RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 IQCGQ9H095 443 aaKnown RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 COPS7BQ9H9Q2 264 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 LYRM4Q9HD34 91 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 PRTFDC1Q9NRG1 225 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 OLAHQ9NV23 265 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 ANKRD10Q9NXR5 420 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 STMN3Q9NZ72 180 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 CPSF2Q9P2I0 782 aaKnown RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 PCTPQ9UKL6 214 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 PCDHGB6Q9Y5F9 930 aa9.65□□□□□ -0.86
SHMT2-224ENST00000556737 RP1L1Q8IWN7 2480 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-224ENST00000556737 A0A1W2PPM1 405 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 WIPF3A6NGB9 483 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 H0YIV9 168 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 SAP18O00422 153 aaKnown RBP9.64□□□□□ -0.87
SHMT2-224ENST00000556737 PLPP1O14494 284 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 OR7A17O14581 309 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 PRKNO60260 465 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-224ENST00000556737 UGDHO60701 494 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 SH3BGRLO75368 114 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 SPAG7O75391 227 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 NEURL1O76050 574 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 MYO1DO94832 1006 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 ETHE1O95571 254 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 TGFB1P01137 390 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 RPS17P08708 135 aaKnown RBP9.64□□□□□ -0.87
SHMT2-224ENST00000556737 MST1P26927 711 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 EEF1DP29692 281 aaKnown RBP9.64□□□□□ -0.87
SHMT2-224ENST00000556737 CD96P40200 585 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 PIK3CBP42338 1070 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 SSR2P43308 183 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 MLF1P58340 268 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 TAS2R50P59544 299 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 TGM3Q08188 693 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 TRAF3Q13114 568 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 DDX39BQ13838 428 aaKnown RBP9.64□□□□□ -0.87
SHMT2-224ENST00000556737 OR1C1Q15619 314 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 TSNAXIP1Q2TAA8 658 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 ZNF766Q5HY98 468 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 LIPJQ5W064 366 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 METTL2BQ6P1Q9 378 aaKnown RBP9.64□□□□□ -0.87
SHMT2-224ENST00000556737 CLNKQ7Z7G1 428 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 TMEM151AQ8N4L1 468 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 ANKRD42Q8N9B4 389 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 ACOT4Q8N9L9 421 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 L3MBTL4Q8NA19 623 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 ARMC2Q8NEN0 867 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 B3GNT7Q8NFL0 401 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 OR52B6Q8NGF0 335 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 CMTM7Q96FZ5 175 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 NSUN5Q96P11 429 aaKnown RBP9.64□□□□□ -0.87
SHMT2-224ENST00000556737 ROGDIQ9GZN7 287 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 OR51B5Q9H339 312 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 CDCP1Q9H5V8 836 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 TRIM45Q9H8W5 580 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-224ENST00000556737 ACTR8Q9H981 624 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 ZBTB26Q9HCK0 441 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 SENP1Q9P0U3 644 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 ABI3Q9P2A4 366 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 MRPS33Q9Y291 106 aaKnown RBP9.64□□□□□ -0.87
SHMT2-224ENST00000556737 CROCCQ5TZA2 2017 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 POLEQ07864 2286 aa9.64□□□□□ -0.87
SHMT2-224ENST00000556737 MAST4O15021 2626 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 TRBV11-1A0A0K0K1C0 115 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 A0A1B0GTL3 188 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 ASPDHA6ND91 283 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms