RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 PDK4Q16654 411 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 C18orf21Q32NC0 220 aaPredicted RBP7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 KBTBD12Q3ZCT8 623 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 FBXO48Q5FWF7 155 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 BEND6Q5SZJ8 279 aaPredicted RBP7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 SPINK14Q6IE38 97 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 SLC25A25Q6KCM7 469 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 CEP128Q6ZU80 1094 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 ZNF595Q8IYB9 648 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 SHISA5Q8N114 240 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 SRFBP1Q8NEF9 429 aaKnown RBP7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 OR2L5Q8NG80 312 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 FBXO25Q8TCJ0 367 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 FBF1Q8TES7 1133 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 KIAA1191Q96A73 305 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 MS4A6EQ96DS6 147 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 SIGLEC12Q96PQ1 595 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 TMEM79Q9BSE2 394 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 MCMBPQ9BTE3 642 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 KRTAP9-2Q9BYQ4 174 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 CD244Q9BZW8 370 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 ROGDIQ9GZN7 287 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 REXO4Q9GZR2 422 aaKnown RBP7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 EHD1Q9H4M9 534 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 NMRAL1Q9HBL8 299 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 NECTIN3Q9NQS3 549 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 PRTFDC1Q9NRG1 225 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 PNO1Q9NRX1 252 aaKnown RBP7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 LRFN1Q9P244 771 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 ANGPTL3Q9Y5C1 460 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 SPACA6W5XKT8 324 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 PTPN13Q12923 2485 aa7.2□□□□□ -1.26
HNRNPC-226ENST00000556628 FLNCQ14315 2725 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 LRIT2A6NDA9 550 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 SYCE1LA8MT33 242 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 SUPT3HB4E1H0 165 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 CCL21O00585 134 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 SUPT3HO75486 399 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 MYO1DO94832 1006 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 WISP3O95389 354 aaPredicted RBP7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 IFNA16P05015 189 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 SP1P08047 785 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 LTA4HP09960 611 aaKnown RBP7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 ESRRAP11474 423 aaPredicted RBP7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 TPP2P29144 1249 aaPredicted RBP7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 HNRNPH1P31943 449 aaKnown RBP7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 KCNC1P48547 511 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 CYB561P49447 251 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 HSD17B7P56937 341 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 GPX6P59796 221 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 PMP22Q01453 160 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 SLC7A5Q01650 507 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 TAGLNQ01995 201 aaKnown RBP7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 GUCY2DQ02846 1103 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 STX4Q12846 297 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 CHIT1Q13231 466 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 RUNX2Q13950 521 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 DOC2AQ14183 400 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 TERF2Q15554 542 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 OR4D1Q15615 310 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 ZKSCAN8Q15776 578 aaPredicted RBP7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 FAM83EQ2M2I3 478 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 KRTCAP3Q53RY4 240 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 EMBQ6PCB8 327 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 LRRC70Q7Z2Q7 622 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 GALNTL5Q7Z4T8 443 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 CCDC91Q7Z6B0 441 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 SLC34A3Q8N130 599 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 TMEM132CQ8N3T6 1108 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 KIF2BQ8N4N8 673 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 TMEM156Q8N614 296 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 AMER2Q8N7J2 671 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 FAM47BQ8NA70 645 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 PDPRQ8NCN5 879 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 MDS2Q8NDY4 140 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 C7orf57Q8NEG2 295 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 B3GNT7Q8NFL0 401 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 RELTQ969Z4 430 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 ESAMQ96AP7 390 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 MAGED4Q96JG8 741 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 UBXN10Q96LJ8 280 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 KCNC2Q96PR1 638 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 SERINC2Q96SA4 455 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 CENPKQ9BS16 269 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 ALG9Q9H6U8 611 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 VIPAS39Q9H9C1 493 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 ZNF446Q9NWS9 450 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 NUDT4Q9NZJ9 180 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 COPG2Q9UBF2 871 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 OPTCQ9UBM4 332 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 SH3BGRL2Q9UJC5 107 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 PTBP2Q9UKA9 531 aaKnown RBP7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 FBXW2Q9UKT8 454 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 ACOT9Q9Y305 439 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 ZGRF1Q86YA3 2104 aa7.19□□□□□ -1.26
HNRNPC-226ENST00000556628 A0A087X1B8 175 aa7.18□□□□□ -1.26
HNRNPC-226ENST00000556628 IGKV3D-11A0A0A0MRZ8 115 aa7.18□□□□□ -1.26
HNRNPC-226ENST00000556628 TRBV11-1A0A0K0K1C0 115 aa7.18□□□□□ -1.26
HNRNPC-226ENST00000556628 CCDC189A1A4V9 331 aa7.18□□□□□ -1.26
HNRNPC-226ENST00000556628 ASPDHA6ND91 283 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms