RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 OR5L2Q8NGL0 311 aa11□□□□□ -0.65
ACTN1-221ENST00000556571 OR8K3Q8NH51 312 aa11□□□□□ -0.65
ACTN1-221ENST00000556571 GAL3ST3Q96A11 431 aa11□□□□□ -0.65
ACTN1-221ENST00000556571 SCYL1Q96KG9 808 aa11□□□□□ -0.65
ACTN1-221ENST00000556571 SIGLEC10Q96LC7 697 aa11□□□□□ -0.65
ACTN1-221ENST00000556571 AICDAQ9GZX7 198 aa11□□□□□ -0.65
ACTN1-221ENST00000556571 EXO5Q9H790 373 aa11□□□□□ -0.65
ACTN1-221ENST00000556571 PCDHGB3Q9Y5G1 929 aa11□□□□□ -0.65
ACTN1-221ENST00000556571 TRGV5A0A0B4J1U4 118 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 B3GALT2O43825 422 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 CTNSO60931 367 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 H2AFYO75367 372 aaKnown RBP10.99□□□□□ -0.65
ACTN1-221ENST00000556571 RAF1P04049 648 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 CELA3AP09093 270 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 GABRB3P28472 473 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 DNASE1L1P49184 302 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 HNRNPFP52597 415 aaKnown RBP10.99□□□□□ -0.65
ACTN1-221ENST00000556571 PDAP1Q13442 181 aaKnown RBP10.99□□□□□ -0.65
ACTN1-221ENST00000556571 RCN2Q14257 317 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 DAZAP2Q15038 168 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-221ENST00000556571 FLYWCH1Q4VC44 716 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 RBM20Q5T481 1227 aaKnown RBP10.99□□□□□ -0.65
ACTN1-221ENST00000556571 PAMR1Q6UXH9 720 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 KLHDC8AQ8IYD2 350 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 AGGF1Q8N302 714 aaeCLIP10.99□□□□□ -0.65
ACTN1-221ENST00000556571 TMEM52Q8NDY8 209 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 TTLQ8NG68 377 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 OR14A16Q8NHC5 309 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 PTPMT1Q8WUK0 201 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-221ENST00000556571 SLCO2A1Q92959 643 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 MAGOHBQ96A72 148 aaKnown RBP10.99□□□□□ -0.65
ACTN1-221ENST00000556571 C18orf12Q96KH6 178 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 OSBPL9Q96SU4 736 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 CNPPD1Q9BV87 410 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 TUBA8Q9NY65 449 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-221ENST00000556571 VTI1BQ9UEU0 232 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 SNX12Q9UMY4 172 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 SLC22A14Q9Y267 594 aa10.99□□□□□ -0.65
ACTN1-221ENST00000556571 VPS13CQ709C8 3753 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 MPDZO75970 2070 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 A0A0G2JN53 185 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 LRIT2A6NDA9 550 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 CYR61O00622 381 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 DVL2O14641 736 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 ERI3O43414 337 aaKnown RBP10.98□□□□□ -0.65
ACTN1-221ENST00000556571 AHSGP02765 367 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 TCP1P17987 556 aaKnown RBP10.98□□□□□ -0.65
ACTN1-221ENST00000556571 PGAM1P18669 254 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 GSTM2P28161 218 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 HPDP32754 393 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-221ENST00000556571 ASCL1P50553 236 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 RNF4P78317 190 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 STX4Q12846 297 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 KEAP1Q14145 624 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 EFTUD2Q15029 972 aaKnown RBP eCLIP10.98□□□□□ -0.652e-8■■■■■ 57.6
ACTN1-221ENST00000556571 DEFB113Q30KQ7 82 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 CLNKQ7Z7G1 428 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 FBXW8Q8N3Y1 598 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 RASGEF1CQ8N431 466 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 FAM47BQ8NA70 645 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 WFDC11Q8NEX6 87 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 RNASE6Q93091 150 aaKnown RBP10.98□□□□□ -0.65
ACTN1-221ENST00000556571 MS4A6EQ96DS6 147 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 PDLIM5Q96HC4 596 aaKnown RBP10.98□□□□□ -0.65
ACTN1-221ENST00000556571 MS4A14Q96JA4 679 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 ALOXE3Q9BYJ1 711 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 OR8D2Q9GZM6 311 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 SEMA4BQ9NPR2 832 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-221ENST00000556571 DMRT3Q9NQL9 472 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 MTRF1LQ9UGC7 380 aaKnown RBP10.98□□□□□ -0.65
ACTN1-221ENST00000556571 FOXD3Q9UJU5 478 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-221ENST00000556571 CBLCQ9ULV8 474 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 ATG4BQ9Y4P1 393 aa10.98□□□□□ -0.65
ACTN1-221ENST00000556571 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.98□□□□□ -0.65
ACTN1-221ENST00000556571 HRNRQ86YZ3 2850 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-221ENST00000556571 CES2O00748 559 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 ATE1O95260 518 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 TTC4O95801 387 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 C1GALT1C1LP0DN25 315 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 CCL3P10147 92 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 GNAZP19086 355 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 TNNI3P19429 210 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 ENDOUP21128 410 aaKnown RBP10.97□□□□□ -0.65
ACTN1-221ENST00000556571 HNRNPH1P31943 449 aaKnown RBP10.97□□□□□ -0.65
ACTN1-221ENST00000556571 LIM2P55344 173 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 TBL3Q12788 808 aaKnown RBP10.97□□□□□ -0.65
ACTN1-221ENST00000556571 SERTAD2Q14140 314 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 CRYMQ14894 314 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 MPEG1Q2M385 716 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 FBXL19-AS1Q494R0 122 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 FBXW10Q5XX13 1052 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 SLC22A10Q63ZE4 541 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 SBSNQ6UWP8 590 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 TMIGD1Q6UXZ0 262 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 GALNT7Q86SF2 657 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 CNTN4Q8IWV2 1026 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.97□□□□□ -0.655e-8■■■■■ 204.6
ACTN1-221ENST00000556571 ULK2Q8IYT8 1036 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 NAT8LQ8N9F0 302 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 ACTRT1Q8TDG2 376 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms