RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 CCBE1Q6UXH8 406 aaPredicted RBP14.2□□□□□ -0.14
CUX1-215ENST00000556210 BCDIN3DQ7Z5W3 292 aaKnown RBP14.2□□□□□ -0.14
CUX1-215ENST00000556210 B3GNT8Q7Z7M8 397 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 LRRTM4Q86VH4 590 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 GALNT13Q8IUC8 556 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 MSRB3Q8IXL7 192 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 C16orf78Q8WTQ4 265 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 SLC6A16Q9GZN6 736 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 FBXL12Q9NXK8 326 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 RNF6Q9Y252 685 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 DOCK6Q96HP0 2047 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 DLGAP1O14490 977 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 CPNE6O95741 557 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 RETP07949 1114 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 PAICSP22234 425 aaKnown RBP14.2□□□□□ -0.14
CUX1-215ENST00000556210 PTX3P26022 381 aaPredicted RBP14.2□□□□□ -0.14
CUX1-215ENST00000556210 RCVRNP35243 200 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 ACTR1BP42025 376 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 ACTR1AP61163 376 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 GAB1Q13480 694 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 CAMK1Q14012 370 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 IQCCQ4KMZ1 466 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 TRIM46Q7Z4K8 759 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 ADAMTS16Q8TE57 1224 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 MOV10Q9HCE1 1003 aaKnown RBP14.2□□□□□ -0.14
CUX1-215ENST00000556210 RLIMQ9NVW2 624 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 GPR52Q9Y2T5 361 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 TNS1Q9HBL0 1735 aaKnown RBP14.2□□□□□ -0.14
CUX1-215ENST00000556210 M0R3H8 397 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 NDUFB5O43674 189 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 ANXA8P13928 327 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 IDSP22304 550 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 GADD45AP24522 165 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 RPL3P39023 403 aaKnown RBP14.2□□□□□ -0.14
CUX1-215ENST00000556210 RGS8P57771 180 aaPredicted RBP14.2□□□□□ -0.14
CUX1-215ENST00000556210 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.2□□□□□ -0.14
CUX1-215ENST00000556210 SIX5Q8N196 739 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 MUL1Q969V5 352 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 SLC35G5Q96KT7 338 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 CITED4Q96RK1 184 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 RBCK1Q9BYM8 510 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 QRSL1Q9H0R6 528 aaKnown RBP14.2□□□□□ -0.14
CUX1-215ENST00000556210 HS3ST2Q9Y278 367 aa14.2□□□□□ -0.14
CUX1-215ENST00000556210 CCR8P51685 355 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 HYAL2Q12891 473 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 GPM6BQ13491 265 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 GPR68Q15743 365 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 ENPP7Q6UWV6 458 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 MAGEB10Q96LZ2 347 aaPredicted RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 OR51E2Q9H255 320 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 SIAEQ9HAT2 523 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 RPRD1BQ9NQG5 326 aaKnown RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 DNAJB5O75953 348 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 JUNBP17275 347 aaPredicted RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 CNR2P34972 360 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 XKP51811 444 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 MVKQ03426 396 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 MRPL28Q13084 256 aaKnown RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 LRRC26Q2I0M4 334 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 ADPRMQ3LIE5 342 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 SLC35F1Q5T1Q4 408 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 USP43Q70EL4 1123 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 ZBED6CLQ96FA7 236 aaPredicted RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 ABCG4Q9H172 646 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 CRNNQ9UBG3 495 aaPredicted RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 PEX16Q9Y5Y5 336 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 ZNF780BQ9Y6R6 833 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 LRRC72A6NJI9 287 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 HEPACAM2A8MVW5 462 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 RAB25P57735 213 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 SLC7A9P82251 487 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 ZNF57Q68EA5 555 aaPredicted RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 SHQ1Q6PI26 577 aaKnown RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 C6orf120Q7Z4R8 191 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 LSRQ86X29 649 aaPredicted RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 ZNF761Q86XN6 746 aaPredicted RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 OR6Q1Q8NGQ2 317 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 ENKURQ8TC29 256 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 NXPE3Q969Y0 559 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 CEP295NLQ96MC4 621 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 RNF167Q9H6Y7 350 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 RDH14Q9HBH5 336 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 MRPS30Q9NP92 439 aaKnown RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 GTF2A1LQ9UNN4 478 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 OR51B4Q9Y5P0 310 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 PIKFYVEQ9Y2I7 2098 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 KLK8O60259 260 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 MPC1LP0DKB6 136 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 ADRB3P13945 408 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 CD40LGP29965 261 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 BTN3A2P78410 334 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 IL18R1Q13478 541 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 DDI2Q5TDH0 399 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 ALG1LQ6GMV1 187 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 ARMC6Q6NXE6 501 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 NXPE4Q6UWF7 544 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 ERN2Q76MJ5 926 aaKnown RBP14.19□□□□□ -0.14
CUX1-215ENST00000556210 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.19□□□□□ -0.141e-9■□□□□ 9.1
CUX1-215ENST00000556210 ZNF675Q8TD23 568 aa14.19□□□□□ -0.14
CUX1-215ENST00000556210 ADAMTS19Q8TE59 1207 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms