RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PPP1R14CQ8TAE6 165 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 LINC01560Q8TB33 94 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 NT5CQ8TCD5 201 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 UTP15Q8TED0 518 aaKnown RBP8.38□□□□□ -1.07
PRKCH-218ENST00000555628 SMPDL3BQ92485 455 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 NCLNQ969V3 563 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 VMP1Q96GC9 406 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 SMIM10Q96HG1 83 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 FAM46AQ96IP4 442 aaKnown RBP8.38□□□□□ -1.07
PRKCH-218ENST00000555628 SCYL1Q96KG9 808 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 Q96MF0 132 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 PANX2Q96RD6 677 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 FAM173AQ9BQD7 235 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 CCDC177Q9NQR7 707 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-218ENST00000555628 KLHL42Q9P2K6 505 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 MYOTQ9UBF9 498 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 ZNF629Q9UEG4 869 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-218ENST00000555628 DRG1Q9Y295 367 aaKnown RBP8.38□□□□□ -1.07
PRKCH-218ENST00000555628 ATG4BQ9Y4P1 393 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 NPFFR2Q9Y5X5 522 aa8.38□□□□□ -1.07
PRKCH-218ENST00000555628 TUBAL3A6NHL2 446 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 A8MUA0 341 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 A8MVJ9 347 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 H3BMM5 538 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 NDUFS4O43181 175 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 CEP104O60308 925 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 RFPL3SP0C7P2 107 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 SLC35G6P0C7Q6 338 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 ZNF888P0CJ79 500 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-218ENST00000555628 CCL3P10147 92 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 CDH1P12830 882 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 CNR1P21554 472 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 FMO4P31512 558 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 DNASE1L1P49184 302 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 MAN2A2P49641 1150 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 HNRNPFP52597 415 aaKnown RBP8.37□□□□□ -1.07
PRKCH-218ENST00000555628 HK2P52789 917 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 PLGLB1Q02325 96 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 TRIM14Q14142 442 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 PCID2Q5JVF3 399 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 XP32Q5T750 250 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 WLSQ5T9L3 541 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 ZNF549Q6P9A3 640 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 CENPUQ71F23 418 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 FBXW8Q8N3Y1 598 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 PRELID2Q8N945 189 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 GOLM1Q8NBJ4 401 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 TMEM52Q8NDY8 209 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 SARAFQ96BY9 339 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 PDLIM2Q96JY6 352 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 WDR83Q9BRX9 315 aaKnown RBP8.37□□□□□ -1.07
PRKCH-218ENST00000555628 SPNS1Q9H2V7 528 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 LIN28AQ9H9Z2 209 aaKnown RBP8.37□□□□□ -1.07
PRKCH-218ENST00000555628 CLK4Q9HAZ1 481 aaKnown RBP8.37□□□□□ -1.07
PRKCH-218ENST00000555628 PROK2Q9HC23 129 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 HPF1Q9NWY4 346 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 TUBA8Q9NY65 449 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-218ENST00000555628 FBXW2Q9UKT8 454 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 ACAD8Q9UKU7 415 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 MMACHCQ9Y4U1 282 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 MED12Q93074 2177 aa8.37□□□□□ -1.07
PRKCH-218ENST00000555628 USF3Q68DE3 2245 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 TRGV5A0A0B4J1U4 118 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 ATP6AP2A0A1C7CYW4 349 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 GOLGA8KD6RF30 607 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 GOLGA8TH3BQL2 631 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 CLDN4O14493 209 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 DVL2O14641 736 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 ARHGEF9O43307 516 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 ATP6AP2O75787 350 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 EPPINO95925 133 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 MBD3O95983 291 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 MPC1LP0DKB6 136 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 NPPBP16860 134 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 RWDD2BP57060 319 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 PPP2R2BQ00005 443 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 PCDH1Q08174 1060 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 CRYZQ08257 329 aaKnown RBP8.36□□□□□ -1.07
PRKCH-218ENST00000555628 CUL1Q13616 776 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 ZNF750Q32MQ0 723 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 RNF187Q5TA31 235 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-218ENST00000555628 THEMIS2Q5TEJ8 643 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 MEI1Q5TIA1 1274 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 IL20RBQ6UXL0 311 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 PPP1R21Q6ZMI0 780 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 MBOAT1Q6ZNC8 495 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 RTL4Q6ZR62 310 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 MAATS1Q7Z4T9 603 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 YTHDF3Q7Z739 585 aaKnown RBP8.36□□□□□ -1.07
PRKCH-218ENST00000555628 PRUNE1Q86TP1 453 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 CA13Q8N1Q1 262 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 LRRC25Q8N386 305 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-218ENST00000555628 PPHLN1Q8NEY8 458 aaKnown RBP8.36□□□□□ -1.07
PRKCH-218ENST00000555628 CD200R1Q8TD46 325 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 ASB15Q8WXK1 588 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 ATG4AQ8WYN0 398 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 KIAA1191Q96A73 305 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 MFSD3Q96ES6 412 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 DMRTB1Q96MA1 342 aa8.36□□□□□ -1.07
PRKCH-218ENST00000555628 DACH2Q96NX9 599 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms