RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 CGB2Q6NT52 195 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 EPGNQ6UW88 154 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 IGFL3Q6UXB1 125 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 PRSS41Q7RTY9 318 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 PRSS58Q8IYP2 241 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 ANKS4BQ8N8V4 417 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 CCDC197Q8NCU1 140 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 OR9A4Q8NGU2 314 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 RFWD2Q8NHY2 731 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 MIB2Q96AX9 1013 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 MMABQ96EY8 250 aaPredicted RBP9.09□□□□□ -0.95
ACTN1-215ENST00000555616 RILPQ96NA2 401 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 MESP1Q9BRJ9 268 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 TMEM120AQ9BXJ8 343 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 SPNS1Q9H2V7 528 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 RHBGQ9H310 441 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 ZNF552Q9H707 407 aaPredicted RBP9.09□□□□□ -0.95
ACTN1-215ENST00000555616 BRF2Q9HAW0 419 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 ATP13A2Q9NQ11 1180 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 TCF7L2Q9NQB0 619 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 ARL2BPQ9Y2Y0 163 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 SLC22A7Q9Y694 548 aa9.09□□□□□ -0.95
ACTN1-215ENST00000555616 HECTD1Q9ULT8 2610 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 LOC102723996A0A087X1L8 192 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 SERTM1A2A2V5 107 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 MASP2O00187 686 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 FOXE1O00358 373 aaPredicted RBP9.08□□□□□ -0.96
ACTN1-215ENST00000555616 ZNF195O14628 629 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 LCMT2O60294 686 aaKnown RBP9.08□□□□□ -0.96
ACTN1-215ENST00000555616 ALOX12BO75342 701 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 HPP00738 406 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 PDYNP01213 254 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 LINC00032P0C843 101 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 COX6A1P12074 109 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 IL1RNP18510 177 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 ITGA3P26006 1051 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 EPHA3P29320 983 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 SCTRP47872 440 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 CD97P48960 835 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 IDH3AP50213 366 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 HTR6P50406 440 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 NEK2P51955 445 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 EFNA3P52797 238 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 MAT1AQ00266 395 aaKnown RBP9.08□□□□□ -0.96
ACTN1-215ENST00000555616 KCNC4Q03721 635 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 SF3A3Q12874 501 aaKnown RBP eCLIP9.08□□□□□ -0.966e-36■■■■□ 21.7
ACTN1-215ENST00000555616 PWP1Q13610 501 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 ABRAXAS2Q15018 415 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 NR6A1Q15406 480 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 SYT16Q17RD7 645 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 ATP6AP1LQ52LC2 224 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 XKR7Q5GH72 579 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 TCHHL1Q5QJ38 904 aaPredicted RBP9.08□□□□□ -0.96
ACTN1-215ENST00000555616 SLC6A19Q695T7 634 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 NXNQ6DKJ4 435 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 JMJD6Q6NYC1 403 aaPredicted RBP9.08□□□□□ -0.96
ACTN1-215ENST00000555616 MAVSQ7Z434 540 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 TRIM46Q7Z4K8 759 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 LAPTM4BQ86VI4 370 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 PDSS2Q86YH6 399 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.08□□□□□ -0.965e-8■■■■■ 204.6
ACTN1-215ENST00000555616 RBMXL3Q8N7X1 1067 aaKnown RBP9.08□□□□□ -0.96
ACTN1-215ENST00000555616 Q8NA96 180 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 KCT2Q8NC54 265 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 ZNF740Q8NDX6 193 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 TRPV3Q8NET8 790 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 CEP70Q8NHQ1 597 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 HUS1BQ8NHY5 278 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 ZCCHC10Q8TBK6 192 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 WDR20Q8TBZ3 569 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 NT5CQ8TCD5 201 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 ACTRT2Q8TDY3 377 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 C10orf82Q8WW14 230 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 SLC13A3Q8WWT9 602 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 TM9SF4Q92544 642 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 PNPLA2Q96AD5 504 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 TUBGCP3Q96CW5 907 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 MTFMTQ96DP5 389 aaKnown RBP9.08□□□□□ -0.96
ACTN1-215ENST00000555616 PPP1R36Q96LQ0 422 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 PPP3R2Q96LZ3 170 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 MTERF1Q99551 399 aaKnown RBP9.08□□□□□ -0.96
ACTN1-215ENST00000555616 SERPINI1Q99574 410 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 MACROD1Q9BQ69 325 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 CENPKQ9BS16 269 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 CCDC28BQ9BUN5 200 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 DMRT3Q9NQL9 472 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 FARSBQ9NSD9 589 aaKnown RBP9.08□□□□□ -0.96
ACTN1-215ENST00000555616 ZFP69BQ9UJL9 534 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 PPT2Q9UMR5 302 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 TRIM33Q9UPN9 1127 aa9.08□□□□□ -0.96
ACTN1-215ENST00000555616 NBASA2RRP1 2371 aa9.07□□□□□ -0.96
ACTN1-215ENST00000555616 GOLGA8QA0A0J9YX86 632 aa9.07□□□□□ -0.96
ACTN1-215ENST00000555616 ATP6AP2A0A1C7CYW4 349 aa9.07□□□□□ -0.96
ACTN1-215ENST00000555616 GOLGA8OA6NCC3 632 aa9.07□□□□□ -0.96
ACTN1-215ENST00000555616 GOLGA8NF8WBI6 632 aa9.07□□□□□ -0.96
ACTN1-215ENST00000555616 SDHDO14521 159 aa9.07□□□□□ -0.96
ACTN1-215ENST00000555616 NDUFS4O43181 175 aa9.07□□□□□ -0.96
ACTN1-215ENST00000555616 CLEC3AO75596 197 aa9.07□□□□□ -0.96
ACTN1-215ENST00000555616 ATP6AP2O75787 350 aa9.07□□□□□ -0.96
ACTN1-215ENST00000555616 RSL1D1O76021 490 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms