RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 SERPINB8P50452 374 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 CASP6P55212 293 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 STX4Q12846 297 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 DDX39BQ13838 428 aaKnown RBP12.87□□□□□ -0.35
PCNX4-209ENST00000555569 SETDB1Q15047 1291 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 PFKFB4Q16877 469 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 AP5B1Q2VPB7 878 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 UBAP2Q5T6F2 1119 aaKnown RBP12.87□□□□□ -0.35
PCNX4-209ENST00000555569 RELL1Q8IUW5 271 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 TMEM156Q8N614 296 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 ZNF592Q92610 1267 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 MAPKAP1Q9BPZ7 522 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 ALOXE3Q9BYJ1 711 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 TSPYL1Q9H0U9 437 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 OR51B5Q9H339 312 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 DMGDHQ9UI17 866 aaKnown RBP12.87□□□□□ -0.35
PCNX4-209ENST00000555569 SH3BGRL2Q9UJC5 107 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 NPIPA1Q9UND3 350 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 KLF13Q9Y2Y9 288 aaPredicted RBP12.87□□□□□ -0.35
PCNX4-209ENST00000555569 CLCA3PQ9Y6N3 262 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 SPACA6W5XKT8 324 aa12.87□□□□□ -0.35
PCNX4-209ENST00000555569 MYOCOSA0A1B0GUC4 107 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 LRRC14BA6NHZ5 514 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 KLK8O60259 260 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 PRKNO60260 465 aaPredicted RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 LDB3O75112 727 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 ITGA10O75578 1167 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 ZFAND5O76080 213 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 ALDOAP04075 364 aaKnown RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 HIST1H1TP22492 207 aaPredicted RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 RAP1GDS1P52306 607 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 ALDH18A1P54886 795 aaKnown RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 SERTAD2Q14140 314 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 C3AR1Q16581 482 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 DEPDC1Q5TB30 811 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 KHDRBS2Q5VWX1 349 aaKnown RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 LIPJQ5W064 366 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 MTFR2Q6P444 385 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 MYLK4Q86YV6 388 aaPredicted RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 SIAH3Q8IW03 269 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 CYP4Z2PQ8N1L4 340 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 RNF175Q8N4F7 328 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 CPSF7Q8N684 471 aaKnown RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 NOA1Q8NC60 698 aaKnown RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 MNS1Q8NEH6 495 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 HUS1BQ8NHY5 278 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 SLC44A1Q8WWI5 657 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 ITLN2Q8WWU7 325 aaPredicted RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 DAZLQ92904 295 aaKnown RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 CCDC120Q96HB5 630 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 MAGED4Q96JG8 741 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 GPR78Q96P69 363 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 FUT8Q9BYC5 575 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 VPS11Q9H270 941 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 CDC42EP4Q9H3Q1 356 aaKnown RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 ACTR8Q9H981 624 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 DMRT3Q9NQL9 472 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 CPSF2Q9P2I0 782 aaKnown RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 VTI1BQ9UEU0 232 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 YARS2Q9Y2Z4 477 aaKnown RBP12.86□□□□□ -0.35
PCNX4-209ENST00000555569 PCDHGA11Q9Y5H2 935 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 EML6Q6ZMW3 1958 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 CRYBG3Q68DQ2 2970 aa12.86□□□□□ -0.35
PCNX4-209ENST00000555569 NCOA6Q14686 2063 aaPredicted RBP12.85□□□□□ -0.35
PCNX4-209ENST00000555569 SAP18O00422 153 aaKnown RBP12.85□□□□□ -0.35
PCNX4-209ENST00000555569 ASNA1O43681 348 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 UGDHO60701 494 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 ACSL3O95573 720 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 INHBAP08476 426 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 ZNF24P17028 368 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 CPN2P22792 545 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 PIK3CBP42338 1070 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 MEOX1P50221 254 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 SSR4P51571 173 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 PHEXP78562 749 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 GTF2H2Q13888 395 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 PCBP2Q15366 365 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCNX4-209ENST00000555569 TECRLQ5HYJ1 363 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 OR4C11Q6IEV9 310 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 GTF2H2CQ6P1K8 395 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 HSDL2Q6YN16 418 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 Q6ZPB1 254 aaPredicted RBP12.85□□□□□ -0.35
PCNX4-209ENST00000555569 SPPL2CQ8IUH8 684 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 SLC34A3Q8N130 599 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 GHDCQ8N2G8 530 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 POGLUT1Q8NBL1 392 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 MORN4Q8NDC4 146 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 OR14A16Q8NHC5 309 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 PTPMT1Q8WUK0 201 aaPredicted RBP12.85□□□□□ -0.35
PCNX4-209ENST00000555569 IFT81Q8WYA0 676 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 RGMAQ96B86 450 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 FMO2Q99518 471 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 CENPKQ9BS16 269 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 SORBS1Q9BX66 1292 aaKnown RBP12.85□□□□□ -0.35
PCNX4-209ENST00000555569 ZNF835Q9Y2P0 537 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 TSC22D4Q9Y3Q8 395 aa12.85□□□□□ -0.35
PCNX4-209ENST00000555569 TNPO3Q9Y5L0 923 aaKnown RBP12.85□□□□□ -0.35
PCNX4-209ENST00000555569 DNAJC13O75165 2243 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 CACNA1CQ13936 2221 aa12.84□□□□□ -0.35
PCNX4-209ENST00000555569 C17orf105B2RV13 164 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms