RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 TSPAN17Q96FV3 270 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 SEC16BQ96JE7 1060 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 NPLQ9BXD5 320 aaPredicted RBP10.07□□□□□ -0.8
TDP1-212ENST00000555565 DEFB126Q9BYW3 111 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 PITHD1Q9GZP4 211 aaPredicted RBP10.07□□□□□ -0.8
TDP1-212ENST00000555565 REXO4Q9GZR2 422 aaKnown RBP10.07□□□□□ -0.8
TDP1-212ENST00000555565 CNOT10Q9H9A5 744 aaKnown RBP10.07□□□□□ -0.8
TDP1-212ENST00000555565 COQ3Q9NZJ6 369 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 TXNDC16Q9P2K2 825 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 ST6GALNAC2Q9UJ37 374 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 ZNF223Q9UK11 482 aaPredicted RBP10.07□□□□□ -0.8
TDP1-212ENST00000555565 PTBP2Q9UKA9 531 aaKnown RBP10.07□□□□□ -0.8
TDP1-212ENST00000555565 PPIEQ9UNP9 301 aaKnown RBP10.07□□□□□ -0.8
TDP1-212ENST00000555565 RNF6Q9Y252 685 aa10.07□□□□□ -0.8
TDP1-212ENST00000555565 JMJD1CQ15652 2540 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 KIAA1324LA8MWY0 1029 aaPredicted RBP10.06□□□□□ -0.8
TDP1-212ENST00000555565 CYR61O00622 381 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 CLDN4O14493 209 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 FCHO1O14526 889 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 CLGNO14967 610 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 PROM1O43490 865 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 B3GALT2O43825 422 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 CTAG2O75638 210 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 MYO1DO94832 1006 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 MLYCDO95822 493 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 GSTA2P09210 222 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 CLCN2P51788 898 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 HSD17B7P56937 341 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 RAB10P61026 200 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 C2orf54Q08AI8 447 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 TRADDQ15628 312 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 CEBPEQ15744 281 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 PDK4Q16654 411 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 XKR6Q5GH73 641 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 CES4AQ5XG92 561 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 ABHD17CQ6PCB6 329 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 CEP128Q6ZU80 1094 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 Q71RC1 249 aaPredicted RBP10.06□□□□□ -0.8
TDP1-212ENST00000555565 ZNF595Q8IYB9 648 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 CPSF7Q8N684 471 aaKnown RBP10.06□□□□□ -0.8
TDP1-212ENST00000555565 SNX31Q8N9S9 440 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 FAM47BQ8NA70 645 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 FAM98AQ8NCA5 519 aaKnown RBP10.06□□□□□ -0.8
TDP1-212ENST00000555565 PDPRQ8NCN5 879 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 KIAA1191Q96A73 305 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 TMEM125Q96AQ2 219 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 PTCD3Q96EY7 689 aaKnown RBP10.06□□□□□ -0.8
TDP1-212ENST00000555565 F2RL3Q96RI0 385 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 EFCAB11Q9BUY7 163 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 PRTFDC1Q9NRG1 225 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 PNO1Q9NRX1 252 aaKnown RBP10.06□□□□□ -0.8
TDP1-212ENST00000555565 CD274Q9NZQ7 290 aa10.06□□□□□ -0.8
TDP1-212ENST00000555565 EML6Q6ZMW3 1958 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 A0A088AWK7 358 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 PRRG2O14669 202 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 PRKNO60260 465 aaPredicted RBP10.05□□□□□ -0.8
TDP1-212ENST00000555565 CCNT2O60583 730 aaKnown RBP10.05□□□□□ -0.8
TDP1-212ENST00000555565 ITGA10O75578 1167 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 SLC35E2BP0CK96 405 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 ZNF24P17028 368 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 ZNF10P21506 573 aaPredicted RBP10.05□□□□□ -0.8
TDP1-212ENST00000555565 CERS1P27544 350 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 HPDP32754 393 aaPredicted RBP10.05□□□□□ -0.8
TDP1-212ENST00000555565 PTGER1P34995 402 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 SPRP35270 261 aaPredicted RBP10.05□□□□□ -0.8
TDP1-212ENST00000555565 PLTPP55058 493 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 MTTPP55157 894 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 LIM2P55344 173 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 DLX5P56178 289 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 DLG1Q12959 904 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 SLC13A2Q13183 592 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 E2F2Q14209 437 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 KBTBD12Q3ZCT8 623 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 TRIM40Q6P9F5 258 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 ZDHHC24Q6UX98 284 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 MDGA2Q7Z553 956 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 UBE3DQ7Z6J8 389 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 CMC1Q7Z7K0 106 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 ISCA2Q86U28 154 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 BIVMQ86UB2 503 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 CTAGE3PQ8IX95 158 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 RPRMLQ8N4K4 120 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 FBXO25Q8TCJ0 367 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 ANP32BQ92688 251 aaKnown RBP10.05□□□□□ -0.8
TDP1-212ENST00000555565 NCLNQ969V3 563 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 VMP1Q96GC9 406 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 SERINC2Q96SA4 455 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 CSF3RQ99062 836 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 CD244Q9BZW8 370 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 PHACTR1Q9C0D0 580 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 ALG9Q9H6U8 611 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 PRDM7Q9NQW5 492 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 KCMF1Q9P0J7 381 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 FBXW2Q9UKT8 454 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 RNF112Q9ULX5 631 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 DAPP1Q9UN19 280 aa10.05□□□□□ -0.8
TDP1-212ENST00000555565 MRPS33Q9Y291 106 aaKnown RBP10.05□□□□□ -0.8
TDP1-212ENST00000555565 FBN1P35555 2871 aaKnown RBP10.04□□□□□ -0.8
TDP1-212ENST00000555565 MYOCOSA0A1B0GUC4 107 aa10.04□□□□□ -0.8
TDP1-212ENST00000555565 FAM90A27PA6NNH2 459 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms