RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 MAPKAP1Q9BPZ7 522 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 ALOXE3Q9BYJ1 711 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 OR51B5Q9H339 312 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 NPIPA1Q9UND3 350 aa22.81■■□□□ 1.24
PRKCH-216ENST00000555542 UTP20O75691 2785 aaKnown RBP22.81■■□□□ 1.24
PRKCH-216ENST00000555542 ASPDHA6ND91 283 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 NME2P1O60361 137 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 LDB3O75112 727 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 ITGA10O75578 1167 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 NME2P22392 152 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 TRHRP34981 398 aaPredicted RBP22.8■■□□□ 1.24
PRKCH-216ENST00000555542 GTF2H2Q13888 395 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 ZRSR2Q15696 482 aaKnown RBP22.8■■□□□ 1.24
PRKCH-216ENST00000555542 LIPJQ5W064 366 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 GTF2H2CQ6P1K8 395 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 UBE3DQ7Z6J8 389 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 HUS1BQ8NHY5 278 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 RELTQ969Z4 430 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 REPS1Q96D71 796 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 SCYL1Q96KG9 808 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 MTERF1Q99551 399 aaKnown RBP22.8■■□□□ 1.24
PRKCH-216ENST00000555542 PCDHGA11Q9Y5H2 935 aa22.8■■□□□ 1.24
PRKCH-216ENST00000555542 TNPO3Q9Y5L0 923 aaKnown RBP22.8■■□□□ 1.24
PRKCH-216ENST00000555542 DIDO1Q9BTC0 2240 aaKnown RBP22.8■■□□□ 1.24
PRKCH-216ENST00000555542 POC1B-GALNT4F8VUJ3 575 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 CCL21O00585 134 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 ZFAND5O76080 213 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 PIK3CGP48736 1102 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 SERPINB9P50453 376 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 PCDH1Q08174 1060 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 SERTAD2Q14140 314 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 GLE1Q53GS7 698 aaKnown RBP22.79■■□□□ 1.24
PRKCH-216ENST00000555542 KRTCAP3Q53RY4 240 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 CYP4Z2PQ8N1L4 340 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 RNF175Q8N4F7 328 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 SLC44A1Q8WWI5 657 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 RGMAQ96B86 450 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 GPR137Q96N19 417 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 PAFAH2Q99487 392 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 IPPKQ9H8X2 491 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 KCMF1Q9P0J7 381 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 KLF13Q9Y2Y9 288 aaPredicted RBP22.79■■□□□ 1.24
PRKCH-216ENST00000555542 CLDN16Q9Y5I7 305 aa22.79■■□□□ 1.24
PRKCH-216ENST00000555542 LRRC14BA6NHZ5 514 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 SLC19A2O60779 497 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 KRT38O76015 456 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 ZNF24P17028 368 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 PIK3CBP42338 1070 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 SSR4P51571 173 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 ID2Q02363 134 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 PCBP2Q15366 365 aaKnown RBP eCLIP22.78■■□□□ 1.24
PRKCH-216ENST00000555542 CPSF6Q16630 551 aaKnown RBP eCLIP22.78■■□□□ 1.24
PRKCH-216ENST00000555542 TECRLQ5HYJ1 363 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 DEPDC1Q5TB30 811 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 ZNF787Q6DD87 383 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 OR4C11Q6IEV9 310 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 GOLGA7Q7Z5G4 137 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 CPSF7Q8N684 471 aaKnown RBP22.78■■□□□ 1.24
PRKCH-216ENST00000555542 OR14A16Q8NHC5 309 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 UHMK1Q8TAS1 419 aaKnown RBP22.78■■□□□ 1.24
PRKCH-216ENST00000555542 SREK1Q8WXA9 508 aaKnown RBP22.78■■□□□ 1.24
PRKCH-216ENST00000555542 ATP6V1E2Q96A05 226 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 SORBS1Q9BX66 1292 aaKnown RBP22.78■■□□□ 1.24
PRKCH-216ENST00000555542 OR8D2Q9GZM6 311 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 TRIM45Q9H8W5 580 aaPredicted RBP22.78■■□□□ 1.24
PRKCH-216ENST00000555542 DMRT3Q9NQL9 472 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 VTI1BQ9UEU0 232 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 ZNF223Q9UK11 482 aaPredicted RBP22.78■■□□□ 1.24
PRKCH-216ENST00000555542 PPIEQ9UNP9 301 aaKnown RBP22.78■■□□□ 1.24
PRKCH-216ENST00000555542 ERVK-11Q9UQG0 969 aa22.78■■□□□ 1.24
PRKCH-216ENST00000555542 C17orf105B2RV13 164 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 KIF2AO00139 706 aaPredicted RBP22.77■■□□□ 1.24
PRKCH-216ENST00000555542 KLK8O60259 260 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 SIX3O95343 332 aaPredicted RBP22.77■■□□□ 1.24
PRKCH-216ENST00000555542 TUBB4AP04350 444 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 RBP1P09455 135 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 DCTP40126 519 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 CA7P43166 264 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 RPS13P62277 151 aaKnown RBP22.77■■□□□ 1.24
PRKCH-216ENST00000555542 SLAMF1Q13291 335 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 HSDL2Q6YN16 418 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 PLD6Q8N2A8 252 aaKnown RBP22.77■■□□□ 1.24
PRKCH-216ENST00000555542 ARMC10Q8N2F6 343 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 PTGR2Q8N8N7 351 aaPredicted RBP22.77■■□□□ 1.24
PRKCH-216ENST00000555542 MORN4Q8NDC4 146 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 GPR78Q96P69 363 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 FUT8Q9BYC5 575 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 YARS2Q9Y2Z4 477 aaKnown RBP22.77■■□□□ 1.24
PRKCH-216ENST00000555542 NAV2Q8IVL1 2488 aa22.77■■□□□ 1.24
PRKCH-216ENST00000555542 DOPEY1Q5JWR5 2465 aa22.76■■□□□ 1.23
PRKCH-216ENST00000555542 KLRC4-KLRK1H3BQV0 150 aa22.76■■□□□ 1.23
PRKCH-216ENST00000555542 UGDHO60701 494 aa22.76■■□□□ 1.23
PRKCH-216ENST00000555542 WISP2O76076 250 aa22.76■■□□□ 1.23
PRKCH-216ENST00000555542 SCELO95171 688 aa22.76■■□□□ 1.23
PRKCH-216ENST00000555542 ESRRAP11474 423 aaPredicted RBP22.76■■□□□ 1.23
PRKCH-216ENST00000555542 COX7A2P14406 83 aa22.76■■□□□ 1.23
PRKCH-216ENST00000555542 MTFR2Q6P444 385 aa22.76■■□□□ 1.23
PRKCH-216ENST00000555542 ZNF227Q86WZ6 799 aa22.76■■□□□ 1.23
PRKCH-216ENST00000555542 ASB15Q8WXK1 588 aa22.76■■□□□ 1.23
PRKCH-216ENST00000555542 PHF21BQ96EK2 531 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms