RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 FRMPD2BQ6IN97 320 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 ERICH5Q6P6B1 374 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 CEACAM20Q6UY09 585 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 ATCAYQ86WG3 371 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 ADAMTS19Q8TE59 1207 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 EXOSC8Q96B26 276 aaKnown RBP16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 PPCDCQ96CD2 204 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 STOX2Q9P2F5 926 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 FABP12A6NFH5 140 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 INPPL1O15357 1258 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 CSO75390 466 aaKnown RBP16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 IL3P08700 152 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 HLA-FP30511 346 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 SLC6A12P48065 614 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 SPHARQ15513 63 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 C5orf22Q49AR2 442 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 LRRC70Q7Z2Q7 622 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 LACC1Q8IV20 430 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 XAGE5Q8WWM1 108 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 EPYCQ99645 322 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 TBC1D17Q9HA65 648 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 DYRK4Q9NR20 520 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 FAM120CQ9NX05 1096 aaKnown RBP16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 Q9Y3F1 56 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 HSPE1-MOB4S4R3N1 261 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 TLR4O00206 839 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 PSIP1O75475 530 aaKnown RBP16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 CRISP1P54107 249 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 MTAPQ13126 283 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 PUM1Q14671 1186 aaKnown RBP eCLIP16.28■□□□□ 0.27e-7■■■□□ 17.8
PPP4R3A-208ENST00000555462 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.28■□□□□ 0.23e-9■■■■■ 27.9
PPP4R3A-208ENST00000555462 TPRG1Q6ZUI0 275 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 TRMT11Q7Z4G4 463 aaKnown RBP16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 UBQLNLQ8IYU4 475 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 ATP6V1C2Q8NEY4 427 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 MVB12BQ9H7P6 319 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 TRPC4Q9UBN4 977 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 MOSPD1Q9UJG1 213 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 POFUT2Q9Y2G5 429 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 HCN4Q9Y3Q4 1203 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 SCN3AQ9NY46 2000 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 C5orf58C9J3I9 102 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 XPAP23025 273 aaPredicted RBP16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 TUFMP49411 452 aaKnown RBP16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 ZNF544Q6NX49 715 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 TMEM220Q6QAJ8 160 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 USP45Q70EL2 814 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 CCDC190Q86UF4 302 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 TRAPPC5Q8IUR0 188 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 HDHD5Q9BXW7 423 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 RNF186Q9NXI6 227 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 ERVW-1Q9UQF0 538 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 C1orf226A1L170 272 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 SEMA7AO75326 666 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 URODP06132 367 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 SOX18P35713 384 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 PRKCDQ05655 676 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 PLAG1Q6DJT9 500 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 ZNF438Q7Z4V0 828 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 TECPR1Q7Z6L1 1165 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 TMEM150AQ86TG1 271 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 TMEM25Q86YD3 366 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 IFNL1Q8IU54 200 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 L3MBTL4Q8NA19 623 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 OR52E4Q8NGH9 312 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 PLD4Q96BZ4 506 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 EFHD2Q96C19 240 aaPredicted RBP16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 STARD7Q9NQZ5 370 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 NLKQ9UBE8 527 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 TRPM7Q96QT4 1865 aa16.28■□□□□ 0.2
PPP4R3A-208ENST00000555462 C2orf92A0A1B0GVN3 265 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 CCDC182A6NF36 153 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 FADS2P1A8MWK0 482 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 CBLP22681 906 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 PSMA1P25786 263 aaKnown RBP16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 MAN2A2P49641 1150 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 MVDP53602 400 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 TIGD4Q8IY51 512 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 ELMOD1Q8N336 334 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 ZNF557Q8N988 423 aaPredicted RBP16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 WDR20Q8TBZ3 569 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 FCGR1BQ92637 280 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 CLP1Q92989 425 aaKnown RBP16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 NACC2Q96BF6 587 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 MTERF3Q96E29 417 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 YME1L1Q96TA2 773 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 TSSK6Q9BXA6 273 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 GABARAPL3Q9BY60 117 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 CFL2Q9Y281 166 aa16.27■□□□□ 0.2
PPP4R3A-208ENST00000555462 PLXND1Q9Y4D7 1925 aa16.27■□□□□ 0.19
PPP4R3A-208ENST00000555462 A0A1W2PRB8 838 aa16.27■□□□□ 0.19
PPP4R3A-208ENST00000555462 FEZF1A0PJY2 475 aa16.27■□□□□ 0.19
PPP4R3A-208ENST00000555462 ANTXRLA6NF34 631 aa16.27■□□□□ 0.19
PPP4R3A-208ENST00000555462 ANXA8P13928 327 aa16.27■□□□□ 0.19
PPP4R3A-208ENST00000555462 SPINT3P49223 89 aa16.27■□□□□ 0.19
PPP4R3A-208ENST00000555462 P2RY14Q15391 338 aa16.27■□□□□ 0.19
PPP4R3A-208ENST00000555462 CRTC2Q53ET0 693 aaPredicted RBP16.27■□□□□ 0.19
PPP4R3A-208ENST00000555462 ASTLQ6HA08 431 aaPredicted RBP16.27■□□□□ 0.19
PPP4R3A-208ENST00000555462 MTFR2Q6P444 385 aa16.27■□□□□ 0.19
PPP4R3A-208ENST00000555462 CHST9Q7L1S5 443 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms