RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 LBPP18428 481 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 CPN2P22792 545 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 TLX1P31314 330 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-219ENST00000555323 BUD31P41223 144 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-219ENST00000555323 EFNA3P52797 238 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 HSD17B7P56937 341 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 RHAGQ02094 409 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 TNFRSF17Q02223 184 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 MAD2L1Q13257 205 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-219ENST00000555323 VWA5B1Q5TIE3 1220 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 QSOX2Q6ZRP7 698 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 SCUBE1Q8IWY4 988 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 SPACA3Q8IXA5 215 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 CEP70Q8NHQ1 597 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 ACTRT2Q8TDY3 377 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 C16orf78Q8WTQ4 265 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 TANKQ92844 425 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 NAF1Q96HR8 494 aaKnown RBP11.94□□□□□ -0.5
SYNE2-219ENST00000555323 CCNL2Q96S94 520 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-219ENST00000555323 CSF3RQ99062 836 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 VN1R1Q9GZP7 353 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 ACTL8Q9H568 366 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 RPF2Q9H7B2 306 aaKnown RBP11.94□□□□□ -0.5
SYNE2-219ENST00000555323 KCNK13Q9HB14 408 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 SEMA3GQ9NS98 782 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 MRPS33Q9Y291 106 aaKnown RBP11.94□□□□□ -0.5
SYNE2-219ENST00000555323 DLGAP4Q9Y2H0 992 aa11.94□□□□□ -0.5
SYNE2-219ENST00000555323 PTRH2Q9Y3E5 179 aaKnown RBP11.94□□□□□ -0.5
SYNE2-219ENST00000555323 POLR3HQ9Y535 204 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-219ENST00000555323 AKAP13Q12802 2813 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 IGKV3D-11A0A0A0MRZ8 115 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 GNG14A0A1W2PPG7 69 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 A0A1W2PQ72 361 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 C1orf226A1L170 272 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 IDSB3KWA1 339 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 PRMT3O60678 531 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 VIMP08670 466 aaKnown RBP11.93□□□□□ -0.5
SYNE2-219ENST00000555323 PRPS2P11908 318 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 BCKDHAP12694 445 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 DRD2P14416 443 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 WT1P19544 449 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-219ENST00000555323 MMP11P24347 488 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 MAPK1P28482 360 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 EPHA3P29320 983 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 FOLR3P41439 243 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 IDH3AP50213 366 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 HNRNPFP52597 415 aaKnown RBP11.93□□□□□ -0.5
SYNE2-219ENST00000555323 GYS2P54840 703 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 EMP2P54851 167 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 TAS2R50P59544 299 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 ERVK-8P63133 956 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 RPL38P63173 70 aaKnown RBP11.93□□□□□ -0.5
SYNE2-219ENST00000555323 ZNF763Q0D2J5 394 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 SRSF6Q13247 344 aaKnown RBP11.93□□□□□ -0.5
SYNE2-219ENST00000555323 BIKQ13323 160 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 HEPACAMQ14CZ8 416 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 GALNTL6Q49A17 601 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 SLC9B1Q4ZJI4 515 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 NDUFAF5Q5TEU4 345 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 C18orf63Q68DL7 685 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 FAM71E1Q6IPT2 247 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 TMEM205Q6UW68 189 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 SPATA19Q7Z5L4 167 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 CLNKQ7Z7G1 428 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 VASH2Q86V25 355 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 TMEM151BQ8IW70 566 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 FNDC5Q8NAU1 212 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 TMEM52Q8NDY8 209 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 DNAJB14Q8TBM8 379 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 ADAMTS17Q8TE56 1095 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 ZCCHC14Q8WYQ9 949 aaKnown RBP11.93□□□□□ -0.5
SYNE2-219ENST00000555323 PPP1R36Q96LQ0 422 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 SOX17Q9H6I2 414 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-219ENST00000555323 WDR55Q9H6Y2 383 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-219ENST00000555323 MYNNQ9NPC7 610 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 PRTFDC1Q9NRG1 225 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 FGFR1OP2Q9NVK5 253 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 TEX10Q9NXF1 929 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-219ENST00000555323 TAS2R7Q9NYW3 318 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 GIMAP2Q9UG22 337 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 C3orf18Q9UK00 162 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 CES1P1Q9UKY3 287 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 MKL2Q9ULH7 1088 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 RAXQ9Y2V3 346 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 PCDHA9Q9Y5H5 950 aa11.93□□□□□ -0.5
SYNE2-219ENST00000555323 URB1O60287 2271 aaKnown RBP11.93□□□□□ -0.5
SYNE2-219ENST00000555323 LOC102723996A0A087X1L8 192 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 SYNDIG1LA6NDD5 238 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 PGRMC2O15173 223 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 B4GALT2O60909 372 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 AIFM1O95831 613 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 HEXBP07686 556 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 SDC1P18827 310 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 TACR1P25103 407 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 LSP1P33241 339 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 ASMTP46597 345 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 AQP5P55064 265 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 FOXL2P58012 376 aa11.92□□□□□ -0.5
SYNE2-219ENST00000555323 RPS18P62269 152 aaKnown RBP11.92□□□□□ -0.5
SYNE2-219ENST00000555323 BTG2P78543 158 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms