RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PHEXP78562 749 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 HMGCS1Q01581 520 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 TGM3Q08188 693 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 GALNT1Q10472 559 aaPredicted RBP11.58□□□□□ -0.56
SYNE2-214ENST00000554928 TBL3Q12788 808 aaKnown RBP11.58□□□□□ -0.56
SYNE2-214ENST00000554928 CUL3Q13618 768 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 VWA5B1Q5TIE3 1220 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 LIPMQ5VYY2 423 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 FCRLBQ6BAA4 426 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 LRIG3Q6UXM1 1119 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 LINC00696Q6ZRV3 163 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 KBTBD2Q8IY47 623 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 MMP21Q8N119 569 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 CNPY4Q8N129 248 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 KIF2BQ8N4N8 673 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 SRFBP1Q8NEF9 429 aaKnown RBP11.58□□□□□ -0.56
SYNE2-214ENST00000554928 METTL6Q8TCB7 284 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 DOK4Q8TEW6 326 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 ANKRD9Q96BM1 317 aaPredicted RBP11.58□□□□□ -0.56
SYNE2-214ENST00000554928 PKNOX2Q96KN3 472 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 MAGEB10Q96LZ2 347 aaPredicted RBP11.58□□□□□ -0.56
SYNE2-214ENST00000554928 SERPINI1Q99574 410 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 NPAS2Q99743 824 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 ACPTQ9BZG2 426 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 LHPPQ9H008 270 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 DDX31Q9H8H2 851 aaKnown RBP11.58□□□□□ -0.56
SYNE2-214ENST00000554928 LYRM4Q9HD34 91 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 RIC8BQ9NVN3 520 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 PSD3Q9NYI0 1048 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 PPT2Q9UMR5 302 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 SLC12A4Q9UP95 1085 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 ASB4Q9Y574 426 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 PTGDR2Q9Y5Y4 395 aa11.58□□□□□ -0.56
SYNE2-214ENST00000554928 A0A088AWK7 358 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 GLOD5A6NK44 160 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 B8ZZF3 427 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 CTIFO43310 598 aaKnown RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 FGF17O60258 216 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 TRIM13O60858 407 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 SEMA3DO95025 777 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 F10P00742 488 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 SERPINA7P05543 415 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 KLK1P06870 262 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 CYC1P08574 325 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 SFTPCP11686 197 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 ZNF10P21506 573 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 CPN2P22792 545 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 HPDP32754 393 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 SOX11P35716 441 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 PKNOX1P55347 436 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 SLC26A5P58743 744 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 ACTN3Q08043 901 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 SLC13A2Q13183 592 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 BTBD16Q32M84 506 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 CLEC6AQ6EIG7 209 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 DGAT2L6Q6ZPD8 337 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 METTL4Q8N3J2 472 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 ZCCHC7Q8N3Z6 543 aaKnown RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 NFAM1Q8NET5 270 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 MYRIPQ8NFW9 859 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 SREK1Q8WXA9 508 aaKnown RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 CCDC126Q96EE4 140 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 TUBB6Q9BUF5 446 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 SLC29A3Q9BZD2 475 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 ROGDIQ9GZN7 287 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 IQCGQ9H095 443 aaKnown RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 PNO1Q9NRX1 252 aaKnown RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 TEX10Q9NXF1 929 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 PLA2G3Q9NZ20 509 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 PTGFRNQ9P2B2 879 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 C19orf25Q9UFG5 118 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 ZNF223Q9UK11 482 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-214ENST00000554928 SNX6Q9UNH7 406 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 MMACHCQ9Y4U1 282 aa11.57□□□□□ -0.56
SYNE2-214ENST00000554928 COL6A6A6NMZ7 2263 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 SPTA1P02549 2419 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 WDR91A4D1P6 747 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 TMEM233B4DJY2 109 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 SUV39H1O43463 412 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 PROM1O43490 865 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 CTNSO60931 367 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 ERLIN1O75477 346 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 AIFM1O95831 613 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 ENO1P06733 434 aaKnown RBP11.56□□□□□ -0.56
SYNE2-214ENST00000554928 BPGMP07738 259 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 NUDT7P0C024 238 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 FAM58BPP0C7Q3 252 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 HMOX2P30519 316 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 RAE1P78406 368 aaKnown RBP11.56□□□□□ -0.56
SYNE2-214ENST00000554928 FOXK1P85037 733 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 TNFRSF17Q02223 184 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 CASP8Q14790 479 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 CFAP157Q5JU67 520 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 PLAG1Q6DJT9 500 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 COMMD6Q7Z4G1 85 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 GPR180Q86V85 440 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 NUDT13Q86X67 352 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 ZNF595Q8IYB9 648 aa11.56□□□□□ -0.56
SYNE2-214ENST00000554928 C1orf52Q8N6N3 182 aaKnown RBP11.56□□□□□ -0.56
SYNE2-214ENST00000554928 ZNF321PQ8N8H1 164 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms