RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SLC35D1Q9NTN3 355 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ZDHHC18Q9NUE0 388 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ACOXLQ9NUZ1 547 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TMEM184CQ9NVA4 438 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 SETD4Q9NVD3 440 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ARL8BQ9NVJ2 186 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 RAB20Q9NX57 234 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TMEM9Q9P0T7 183 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 RNF14Q9UBS8 474 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 EPHA6Q9UF33 1036 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TBC1D29Q9UFV1 150 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 WARS2Q9UGM6 360 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 BCAP29Q9UHQ4 241 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF221Q9UK13 617 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 NOCTQ9UK39 431 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 MGAT4BQ9UQ53 548 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 NAALADL1Q9UQQ1 740 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 PIN4Q9Y237 131 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 PCDHA10Q9Y5I2 948 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 EMSYQ7Z589 1322 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 WDR87Q6ZQQ6 2873 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 RNF103-CHMP3A0A140T963 221 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 A0A1W2PPL8 197 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 GSAPA4D1B5 854 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 C5orf51A6NDU8 294 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 MFSD2BA6NFX1 497 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 ARHGAP42A6NI28 874 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 METTL15A6NJ78 407 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 BTBD18B2RXH4 712 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 E5RI56 91 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 F5H0A9 414 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 H0Y8G0 127 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 EEF2KO00418 725 aaKnown RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 SH2B2O14492 632 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 ZBTB5O15062 677 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 GPAA1O43292 621 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 SEC14L5O43304 696 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 ARHGEF9O43307 516 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 SGCEO43556 437 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 ENTPD5O75356 428 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 CTAG2O75638 210 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 OAZ2O95190 189 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 GJB5O95377 273 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 AHSA1O95433 338 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 GH2P01242 217 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 IFNA2P01563 188 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 YES1P07947 543 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 RHOP08100 348 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 POU2F2P09086 479 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 DLDP09622 509 aaKnown RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 LINC00614P0C842 121 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 TRAPPC2P0DI81 140 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 TRAPPC2BP0DI82 140 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 TMIGD3P0DMS9 266 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 PF4V1P10720 104 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 MCF2P10911 925 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 MBL2P11226 248 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 RALBP11234 206 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 PFKFB1P16118 471 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF18P17022 549 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 TNNI3P19429 210 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 MMP8P22894 467 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 CALML3P27482 149 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 PIK3R1P27986 724 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 MARCKSP29966 332 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 HNRNPH3P31942 346 aaKnown RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 ICAM3P32942 547 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 EIF2DP41214 584 aaKnown RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 RPL35P42766 123 aaKnown RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 CSNK1DP48730 415 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 VEGFCP49767 419 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 FHITP49789 147 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 CCR5P51681 352 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 BMXP51813 675 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 AKR1D1P51857 326 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 CASP6P55212 293 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 ESRRGP62508 458 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 SSBP2P81877 361 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 MYBPC1Q00872 1141 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 DEFA6Q01524 100 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 DMWDQ09019 674 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 STX4Q12846 297 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 MAPK7Q13164 816 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 DGCR6Q14129 220 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 PDK2Q15119 407 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 ANGPT1Q15389 498 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 DLG2Q15700 870 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 CERKLQ49MI3 558 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 KLHL26Q53HC5 615 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 PDZK1Q5T2W1 519 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 KLHDC7AQ5VTJ3 777 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 RSBN1Q5VWQ0 802 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-227ENST00000554491 FAM91A1Q658Y4 838 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF626Q68DY1 528 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 CLEC6AQ6EIG7 209 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 KIAA1161Q6NSJ0 714 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 CDC73Q6P1J9 531 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 C1orf94Q6P1W5 598 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 TMEM65Q6PI78 240 aa4.22□□□□□ -1.73
ATXN3-227ENST00000554491 TFAP2EQ6VUC0 442 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms