RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 MBD3L2Q8NHZ7 208 aaPredicted RBP6.06□□□□□ -1.44
GPHN-206ENST00000553936 UTP15Q8TED0 518 aaKnown RBP6.06□□□□□ -1.44
GPHN-206ENST00000553936 KCNJ9Q92806 393 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 UCN3Q969E3 161 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 KIAA1191Q96A73 305 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 JSRP1Q96MG2 331 aaPredicted RBP6.06□□□□□ -1.44
GPHN-206ENST00000553936 TRIB1Q96RU8 372 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 SLC30A3Q99726 388 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 SFXN3Q9BWM7 321 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 NPLQ9BXD5 320 aaPredicted RBP6.06□□□□□ -1.44
GPHN-206ENST00000553936 PIGMQ9H3S5 423 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 LIN28AQ9H9Z2 209 aaKnown RBP6.06□□□□□ -1.44
GPHN-206ENST00000553936 CALHM2Q9HA72 323 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 TREX1Q9NSU2 369 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 INTS10Q9NVR2 710 aaKnown RBP6.06□□□□□ -1.44
GPHN-206ENST00000553936 GALNT8Q9NY28 637 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 CNIH4Q9P003 139 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 JKAMPQ9P055 326 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 IFNKQ9P0W0 207 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 ZNF223Q9UK11 482 aaPredicted RBP6.06□□□□□ -1.44
GPHN-206ENST00000553936 CAMK2AQ9UQM7 478 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 MAD1L1Q9Y6D9 718 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 COMMD10Q9Y6G5 202 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 JMJD1CQ15652 2540 aa6.06□□□□□ -1.44
GPHN-206ENST00000553936 HEATR5BQ9P2D3 2071 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 CTAGE9A4FU28 777 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 NRDCO43847 1150 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 PRKNO60260 465 aaPredicted RBP6.05□□□□□ -1.44
GPHN-206ENST00000553936 TRAPPC6AO75865 159 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 VAPBO95292 243 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 IFNB1P01574 187 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 C8GP07360 202 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 CCL3P10147 92 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 COX7A2P14406 83 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 TNNI3P19429 210 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 PIGAP37287 484 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 MC3RP41968 323 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 GRIA1P42261 906 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 NPY2RP49146 381 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 RGS4P49798 205 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 CLCN7P51798 805 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 AGFG1P52594 562 aaKnown RBP6.05□□□□□ -1.44
GPHN-206ENST00000553936 SESN2P58004 480 aaPredicted RBP6.05□□□□□ -1.44
GPHN-206ENST00000553936 RAB8AP61006 207 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 STXBP1P61764 594 aaKnown RBP6.05□□□□□ -1.44
GPHN-206ENST00000553936 RNF4P78317 190 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 CCZ1BP86790 482 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 CCZ1P86791 482 aaPredicted RBP6.05□□□□□ -1.44
GPHN-206ENST00000553936 CRYZQ08257 329 aaKnown RBP6.05□□□□□ -1.44
GPHN-206ENST00000553936 STX4Q12846 297 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 SP140Q13342 867 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 GAB1Q13480 694 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 NAE1Q13564 534 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 CUL1Q13616 776 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 SERTAD2Q14140 314 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 CSHL1Q14406 222 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 EFTUD2Q15029 972 aaKnown RBP eCLIP6.05□□□□□ -1.44
GPHN-206ENST00000553936 SPA17Q15506 151 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 ETFDHQ16134 617 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 MPEG1Q2M385 716 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 WIPI1Q5MNZ9 446 aaPredicted RBP6.05□□□□□ -1.44
GPHN-206ENST00000553936 POMZP3Q6PJE2 187 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 AGTRAPQ6RW13 159 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 PLEKHM3Q6ZWE6 761 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 LUZP2Q86TE4 346 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 HIPK1Q86Z02 1210 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 CNGA4Q8IV77 575 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 SCUBE1Q8IWY4 988 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 CA13Q8N1Q1 262 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 LRRC25Q8N386 305 aaPredicted RBP6.05□□□□□ -1.44
GPHN-206ENST00000553936 SLC15A4Q8N697 577 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 UBL4BQ8N7F7 174 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 CCDC89Q8N998 374 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 PAQR8Q8TEZ7 354 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 TMEM171Q8WVE6 324 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 PIK3IP1Q96FE7 263 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 ZNF597Q96LX8 424 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 CHP1Q99653 195 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 TIMP4Q99727 224 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 TM9SF2Q99805 663 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 AIF1LQ9BQI0 150 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 DOHHQ9BU89 302 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 TRIM54Q9BYV2 358 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 TSGA10Q9BZW7 698 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 PRDM14Q9GZV8 571 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 SLC6A15Q9H2J7 730 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 PARVBQ9HBI1 364 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 RAB6BQ9NRW1 208 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.05□□□□□ -1.44
GPHN-206ENST00000553936 C6orf203Q9P0P8 240 aaPredicted RBP6.05□□□□□ -1.44
GPHN-206ENST00000553936 PAK5Q9P286 719 aa6.05□□□□□ -1.44
GPHN-206ENST00000553936 FBN1P35555 2871 aaKnown RBP6.05□□□□□ -1.44
GPHN-206ENST00000553936 CHD3Q12873 2000 aaKnown RBP6.04□□□□□ -1.44
GPHN-206ENST00000553936 A0A1W2PPR1 153 aa6.04□□□□□ -1.44
GPHN-206ENST00000553936 BTNL10A8MVZ5 291 aa6.04□□□□□ -1.44
GPHN-206ENST00000553936 CAPN14A8MX76 684 aa6.04□□□□□ -1.44
GPHN-206ENST00000553936 PHF1O43189 567 aaPredicted RBP6.04□□□□□ -1.44
GPHN-206ENST00000553936 CTIFO43310 598 aaKnown RBP6.04□□□□□ -1.44
GPHN-206ENST00000553936 CBFA2T2O43439 604 aa6.04□□□□□ -1.44
GPHN-206ENST00000553936 B3GALT2O43825 422 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms