RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 EEDO75530 441 aaKnown RBP15.2■□□□□ 0.02
ACTN1-209ENST00000553659 BCAS2O75934 225 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-209ENST00000553659 ANPEPP15144 967 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 JAK1P23458 1154 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 ATP1A4Q13733 1029 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 SSPNQ14714 243 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 AP5B1Q2VPB7 878 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 ZNF658BQ4V348 819 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-209ENST00000553659 ZNF385CQ66K41 422 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-209ENST00000553659 UNC5DQ6UXZ4 953 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 LRRC74BQ6ZQY2 392 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 AMIGO1Q86WK6 493 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 VRK3Q8IV63 474 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 PHC3Q8NDX5 983 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 OR2T11Q8NH01 316 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 IP6K3Q96PC2 410 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 TRIM15Q9C019 465 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 MVB12BQ9H7P6 319 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 TMEM181Q9P2C4 612 aa15.2■□□□□ 0.02
ACTN1-209ENST00000553659 ZNF490Q9ULM2 529 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-209ENST00000553659 NUP210LQ5VU65 1888 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 A1L4Q6 167 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 WIPF3A6NGB9 483 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 ARHGEF33A8MVX0 844 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 C2orf74A8MZ97 194 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 CLGNO14967 610 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 DNAJA2O60884 412 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 KLF7O75840 302 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-209ENST00000553659 RPN2P04844 631 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 PRPS2P11908 318 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 HSD3B1P14060 373 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 PVRP15151 417 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 HSD3B2P26439 372 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 HNF4AP41235 474 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 GDF5P43026 501 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 HTR6P50406 440 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 POLR2JP52435 117 aaKnown RBP15.19■□□□□ 0.02
ACTN1-209ENST00000553659 BNIP2Q12982 314 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 CSTF3Q12996 717 aaKnown RBP15.19■□□□□ 0.02
ACTN1-209ENST00000553659 CCNIQ14094 377 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 ABRAXAS2Q15018 415 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 PLEKHN1Q494U1 663 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-209ENST00000553659 TCHHL1Q5QJ38 904 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-209ENST00000553659 IRAK1BP1Q5VVH5 260 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 GPR135Q8IZ08 494 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 ADGRF3Q8IZF5 1079 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 OR52E1Q8NGJ3 308 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 OR9I1Q8NGQ6 314 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 DNAJB8Q8NHS0 232 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 SLC26A7Q8TE54 656 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 SNRNP40Q96DI7 357 aaKnown RBP15.19■□□□□ 0.02
ACTN1-209ENST00000553659 NRTNQ99748 197 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 C17orf62Q9BQA9 187 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 GPATCH1Q9BRR8 931 aaKnown RBP15.19■□□□□ 0.02
ACTN1-209ENST00000553659 KLHL25Q9H0H3 589 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 LRTM1Q9HBL6 345 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 C1orf109Q9NX04 203 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 ACTR10Q9NZ32 417 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 ABCD2Q9UBJ2 740 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 AP3M1Q9Y2T2 418 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 CCL27Q9Y4X3 112 aa15.19■□□□□ 0.02
ACTN1-209ENST00000553659 DOCK10Q96BY6 2186 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 PCM1Q15154 2024 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 CAPN3P20807 821 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 PDHA2P29803 388 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 OTX2P32243 289 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 CLNS1AP54105 237 aaKnown RBP15.18■□□□□ 0.02
ACTN1-209ENST00000553659 DIO3P55073 304 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 RAPSNQ13702 412 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 CEACAM7Q14002 265 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 TRIM25Q14258 630 aaKnown RBP15.18■□□□□ 0.02
ACTN1-209ENST00000553659 IL23RQ5VWK5 629 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 ICE2Q659A1 982 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 AGTRAPQ6RW13 159 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 CYP20A1Q6UW02 462 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 MBOAT1Q6ZNC8 495 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 DPP10Q8N608 796 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 GOLM1Q8NBJ4 401 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 OR56A3Q8NH54 315 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 SELENOMQ8WWX9 145 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 TFGQ92734 400 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-209ENST00000553659 REPS1Q96D71 796 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 RSRC1Q96IZ7 334 aaKnown RBP15.18■□□□□ 0.02
ACTN1-209ENST00000553659 FER1L6-AS2Q96M78 137 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 C6orf203Q9P0P8 240 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-209ENST00000553659 STOX2Q9P2F5 926 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-209ENST00000553659 MAPRE3Q9UPY8 281 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 B3GNT3Q9Y2A9 372 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 RNF11Q9Y3C5 154 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 LRRC42Q9Y546 428 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 AP1M2Q9Y6Q5 423 aa15.18■□□□□ 0.02
ACTN1-209ENST00000553659 NOTCH2Q04721 2471 aa15.17■□□□□ 0.02
ACTN1-209ENST00000553659 KCNE1BA0A087WTH5 132 aa15.17■□□□□ 0.02
ACTN1-209ENST00000553659 ZNF839A8K0R7 811 aa15.17■□□□□ 0.02
ACTN1-209ENST00000553659 E7ENX8 843 aa15.17■□□□□ 0.02
ACTN1-209ENST00000553659 H3BMH7 237 aa15.17■□□□□ 0.02
ACTN1-209ENST00000553659 IGHEP01854 428 aa15.17■□□□□ 0.02
ACTN1-209ENST00000553659 CD63P08962 238 aa15.17■□□□□ 0.02
ACTN1-209ENST00000553659 EPORP19235 508 aa15.17■□□□□ 0.02
ACTN1-209ENST00000553659 HSD17B2P37059 387 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms