RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 NAE1Q13564 534 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 ZNF791Q3KP31 576 aaPredicted RBP12.66□□□□□ -0.38
PRPF39-204ENST00000553605 WIPI1Q5MNZ9 446 aaPredicted RBP12.66□□□□□ -0.38
PRPF39-204ENST00000553605 PRAMEF20Q5VT98 475 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 AGTRAPQ6RW13 159 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 PLEKHM3Q6ZWE6 761 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 ZNF321PQ8N8H1 164 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 ZNF441Q8N8Z8 693 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 TC2NQ8N9U0 490 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 C9orf106Q8NAJ2 232 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 MORN4Q8NDC4 146 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 GIMAP7Q8NHV1 300 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 PAQR8Q8TEZ7 354 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 DAZLQ92904 295 aaKnown RBP12.66□□□□□ -0.38
PRPF39-204ENST00000553605 WFIKKN1Q96NZ8 548 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 SGPP1Q9BX95 441 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 KLHL31Q9H511 634 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 PROK2Q9HC23 129 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 ZNF701Q9NV72 531 aaPredicted RBP12.66□□□□□ -0.38
PRPF39-204ENST00000553605 ZNF226Q9NYT6 803 aa12.66□□□□□ -0.38
PRPF39-204ENST00000553605 GOLGA6L9A6NEM1 432 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 NRDCO43847 1150 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 PTMAP06454 111 aaKnown RBP12.65□□□□□ -0.38
PRPF39-204ENST00000553605 FAM157CP0CG43 387 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 ENO3P13929 434 aaPredicted RBP12.65□□□□□ -0.38
PRPF39-204ENST00000553605 ARNTP27540 789 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 HNRNPFP52597 415 aaKnown RBP12.65□□□□□ -0.38
PRPF39-204ENST00000553605 ATP5J2P56134 94 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 RWDD2BP57060 319 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 SESN2P58004 480 aaPredicted RBP12.65□□□□□ -0.38
PRPF39-204ENST00000553605 TPM4P67936 248 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 CCZ1BP86790 482 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 CCZ1P86791 482 aaPredicted RBP12.65□□□□□ -0.38
PRPF39-204ENST00000553605 MPEG1Q2M385 716 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 PIGGQ5H8A4 983 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 VASNQ6EMK4 673 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 TMEM52Q8NDY8 209 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 PTPMT1Q8WUK0 201 aaPredicted RBP12.65□□□□□ -0.38
PRPF39-204ENST00000553605 TMEM171Q8WVE6 324 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 HAUS8Q9BT25 410 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 C19orf24Q9BVV8 132 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 SFXN3Q9BWM7 321 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 OR8D2Q9GZM6 311 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 RBSNQ9H1K0 784 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 KLHL28Q9NXS3 571 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 KLHL42Q9P2K6 505 aa12.65□□□□□ -0.38
PRPF39-204ENST00000553605 A8MXE2 369 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 TRAPPC6AO75865 159 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 C1QAP02745 245 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 CRYGSP22914 178 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 AHRP35869 848 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 SCTRP47872 440 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 BTN3A2P78410 334 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 ASPHQ12797 758 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 RUNX2Q13950 521 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 CLEC12BQ2HXU8 276 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 MBOAT1Q6ZNC8 495 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 PIWIL4Q7Z3Z4 852 aaKnown RBP12.64□□□□□ -0.39
PRPF39-204ENST00000553605 CLNKQ7Z7G1 428 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 OR14A16Q8NHC5 309 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 SLC35B2Q8TB61 432 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 IGFBPL1Q8WX77 278 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 MFSD3Q96ES6 412 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 WDYHV1Q96HA8 205 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 HS3ST6Q96QI5 342 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 REG4Q9BYZ8 158 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 AMBRA1Q9C0C7 1298 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 PIGMQ9H3S5 423 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 CXorf56Q9H5V9 222 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 HOMER3Q9NSC5 361 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 CNIH4Q9P003 139 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 IFNKQ9P0W0 207 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 VTI1BQ9UEU0 232 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 SLC6A5Q9Y345 797 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 ABCA1O95477 2261 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
PRPF39-204ENST00000553605 MYOCOSA0A1B0GUC4 107 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 CTAGE15A4D2H0 777 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 SYNDIG1LA6NDD5 238 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 A8MV72 311 aaPredicted RBP12.63□□□□□ -0.39
PRPF39-204ENST00000553605 C4orf51C9J302 202 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 ACSL3O95573 720 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 APRTP07741 180 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 FREM3P0C091 2139 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 TNNI3P19429 210 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 STIP1P31948 543 aaKnown RBP12.63□□□□□ -0.39
PRPF39-204ENST00000553605 MAGEA1P43355 309 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 DIO3P55073 304 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 VEZF1Q14119 521 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 RCAN2Q14206 197 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 CES3Q6UWW8 571 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 CLEC17AQ6ZS10 378 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 CENPUQ71F23 418 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 CTAGE6Q86UF2 777 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 ZNF595Q8IYB9 648 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 TRPV3Q8NET8 790 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 GABPB2Q8TAK5 448 aaPredicted RBP12.63□□□□□ -0.39
PRPF39-204ENST00000553605 SLC44A1Q8WWI5 657 aa12.63□□□□□ -0.39
PRPF39-204ENST00000553605 SPACA9Q96E40 222 aaPredicted RBP12.63□□□□□ -0.39
PRPF39-204ENST00000553605 SNF8Q96H20 258 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms