RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 NAALAD2Q9Y3Q0 740 aa16.65■□□□□ 0.26
PSEN1-206ENST00000553447 A0A1W2PRB8 838 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 FITM1A5D6W6 292 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 NVLO15381 856 aaKnown RBP16.64■□□□□ 0.25
PSEN1-206ENST00000553447 PDPK1O15530 556 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 PRKRAO75569 313 aaKnown RBP16.64■□□□□ 0.25
PSEN1-206ENST00000553447 C6orf47O95873 294 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 ZNF806P0C7X5 589 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 ZCCHC18P0CG32 403 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 NR2F6P10588 404 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 NELFEP18615 380 aaKnown RBP16.64■□□□□ 0.25
PSEN1-206ENST00000553447 TCN1P20061 433 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-206ENST00000553447 MSX2P35548 267 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-206ENST00000553447 LIM2P55344 173 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 ACTR3P61158 418 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 TNFRSF17Q02223 184 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 LIPEQ05469 1076 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 RIPK1Q13546 671 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 NDUFA9Q16795 377 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 TMTC4Q5T4D3 741 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 ZNF574Q6ZN55 896 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-206ENST00000553447 ZNF621Q6ZSS3 439 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 TMPRSS9Q7Z410 1059 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 OR4D9Q8NGE8 314 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 GOT1L1Q8NHS2 421 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-206ENST00000553447 N4BP2L2Q92802 583 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-206ENST00000553447 EXOSC8Q96B26 276 aaKnown RBP16.64■□□□□ 0.25
PSEN1-206ENST00000553447 CNDP2Q96KP4 475 aaKnown RBP16.64■□□□□ 0.25
PSEN1-206ENST00000553447 C10orf90Q96M02 699 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 NPLQ9BXD5 320 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-206ENST00000553447 ENAMQ9NRM1 1142 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 PDP2Q9P2J9 529 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 UTS2RQ9UKP6 389 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 DAPP1Q9UN19 280 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 VPS4AQ9UN37 437 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 AP3M1Q9Y2T2 418 aa16.64■□□□□ 0.25
PSEN1-206ENST00000553447 HYKKA2RU49 373 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 ZNF860A6NHJ4 632 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 PGRMC2O15173 223 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 FLRT2O43155 660 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 DNAJA2O60884 412 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 DNAJB6O75190 326 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 ENTPD5O75356 428 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 MED26O95402 600 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 LDOC1O95751 146 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-206ENST00000553447 ANKRD34CP0C6C1 535 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 CPN2P22792 545 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 BUD31P41223 144 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-206ENST00000553447 FRKP42685 505 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-206ENST00000553447 GSK3BP49841 420 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 PCBP4P57723 403 aaKnown RBP16.63■□□□□ 0.25
PSEN1-206ENST00000553447 HBA1P69905 142 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 OLR1P78380 273 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 MS4A2Q01362 244 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 TRIM25Q14258 630 aaKnown RBP16.63■□□□□ 0.25
PSEN1-206ENST00000553447 CLPPQ16740 277 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-206ENST00000553447 GARNL3Q5VVW2 1013 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 FBXW10Q5XX13 1052 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 SLC48A1Q6P1K1 146 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 PRR23CQ6ZRP0 262 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 C10orf67Q8IYJ2 551 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 CA13Q8N1Q1 262 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 ASB9Q96DX5 294 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 THUMPD3Q9BV44 507 aaKnown RBP16.63■□□□□ 0.25
PSEN1-206ENST00000553447 SPRTNQ9H040 489 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-206ENST00000553447 ALG2Q9H553 416 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 IKZF5Q9H5V7 419 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 SYNDIG1Q9H7V2 258 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 SLAMF7Q9NQ25 335 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 IRAK4Q9NWZ3 460 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 MS4A12Q9NXJ0 267 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 ZNF282Q9UDV7 671 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-206ENST00000553447 CES1P1Q9UKY3 287 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 PCDHGB4Q9UN71 923 aa16.63■□□□□ 0.25
PSEN1-206ENST00000553447 SCN2AQ99250 2005 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 GLOD5A6NK44 160 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 TMEM150CB9EJG8 249 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 SGK494L7N484 410 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 ACOT8O14734 319 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 BCAS2O75934 225 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-206ENST00000553447 ABCB1P08183 1280 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-206ENST00000553447 MSL3P1P0C860 447 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 CKMT2P17540 419 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 EMP3P54852 163 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 SKP1P63208 163 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 TRAP1Q12931 704 aaKnown RBP16.62■□□□□ 0.25
PSEN1-206ENST00000553447 GAB1Q13480 694 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 CCNIQ14094 377 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 FAM53BQ14153 422 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 GRM7Q14831 915 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 SF3A2Q15428 464 aaKnown RBP16.62■□□□□ 0.25
PSEN1-206ENST00000553447 GPR19Q15760 415 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 NIPAL1Q6NVV3 410 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 FAM180BQ6P0A1 224 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 TTC29Q8NA56 475 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-206ENST00000553447 OR9A4Q8NGU2 314 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 OR5P2Q8WZ92 322 aa16.62■□□□□ 0.25
PSEN1-206ENST00000553447 AURKBQ96GD4 344 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-206ENST00000553447 KCTD14Q9BQ13 255 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-206ENST00000553447 ECSITQ9BQ95 431 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms