RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CDC42EP4Q9H3Q1 356 aaKnown RBP10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 IL1RL2Q9HB29 575 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 NECTIN3Q9NQS3 549 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 SPRR3Q9UBC9 169 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 ZNF629Q9UEG4 869 aaPredicted RBP10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 TSR3Q9UJK0 312 aaKnown RBP10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 FBXW2Q9UKT8 454 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 TCAF1Q9Y4C2 921 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 USF3Q68DE3 2245 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 ERI2A8K979 691 aaKnown RBP10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 A8MUA0 341 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 E7EVH7 732 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 GFYI3L273 518 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 DVL2O14641 736 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 HCN1O60741 890 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 NIPSNAP2O75323 286 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 OR6B1O95007 311 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 MAOAP21397 527 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 BMP5P22003 454 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 FDFT1P37268 417 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 MAN2A2P49641 1150 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 SORDQ00796 357 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 KRTAP1-1Q07627 177 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 SLC10A1Q14973 349 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 FASTKD3Q14CZ7 662 aaKnown RBP10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 HERC3Q15034 1050 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 TERF2Q15554 542 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 BBS9Q3SYG4 887 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 CATSPEREQ5SY80 951 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 FBXW10Q5XX13 1052 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 C16orf47Q6ZP98 133 aaPredicted RBP10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 GK5Q6ZS86 529 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 ANKMY2Q8IV38 441 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 DEPDC4Q8N2C3 294 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 VWA5B2Q8N398 1253 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 ZNF740Q8NDX6 193 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 OR2W6PQ8NHA6 318 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 FAM173AQ9BQD7 235 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 AARSD1Q9BTE6 412 aaKnown RBP10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 ACBD3Q9H3P7 528 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 PRDM9Q9NQV7 894 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 NINJ2Q9NZG7 142 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 ERVK-11Q9UQG0 969 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 SH2B3Q9UQQ2 575 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 CLDN16Q9Y5I7 305 aa10.51□□□□□ -0.73
SUPT16H-202ENST00000552829 RAI1Q7Z5J4 1906 aaPredicted RBP10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 TRIM64A6NGJ6 449 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 TRIM64BA6NI03 449 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 A8MVJ9 347 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 KDM4EB2RXH2 506 aaPredicted RBP10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 ATP8B1O43520 1251 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 SMPD2O60906 423 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 NDUFS3O75489 264 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 ACSL3O95573 720 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 EPPINO95925 133 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 B3GALT4O96024 378 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 APRTP07741 180 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 ALOX12P18054 663 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 IMPA1P29218 277 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 TIMP3P35625 211 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 EIF3BP55884 814 aaKnown RBP10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 ARL4CP56559 192 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 OLR1P78380 273 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 PDIA2Q13087 525 aaKnown RBP10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 SLMAPQ14BN4 828 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 CAPN13Q6MZZ7 669 aaPredicted RBP10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 IL20RBQ6UXL0 311 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 YTHDF3Q7Z739 585 aaKnown RBP10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 FBXW8Q8N3Y1 598 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 MFSD9Q8NBP5 474 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 TNIP2Q8NFZ5 429 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 ASB11Q8WXH4 323 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 SMPDL3BQ92485 455 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 LPGAT1Q92604 370 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 VMP1Q96GC9 406 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 EPB41L4BQ9H329 900 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 CLK4Q9HAZ1 481 aaKnown RBP10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 SEMA4BQ9NPR2 832 aaPredicted RBP10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 TREX1Q9NSU2 369 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 HPF1Q9NWY4 346 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 ALKBH4Q9NXW9 302 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 JKAMPQ9P055 326 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 ZFATQ9P243 1243 aa10.5□□□□□ -0.73
SUPT16H-202ENST00000552829 TRGV5A0A0B4J1U4 118 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 ATP6AP2A0A1C7CYW4 349 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 G3V3Y1 287 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 H3BMM5 538 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 RIPK2O43353 540 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 ATP6AP2O75787 350 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 OR2J2O76002 312 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 ZFAND5O76080 213 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 SHBGP04278 402 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 TPSB2P20231 275 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 ARNTP27540 789 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 FMO4P31512 558 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 SOX3P41225 446 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 MAGEA4P43358 317 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 ZNF136P52737 540 aa10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 ADARP55265 1226 aaKnown RBP10.49□□□□□ -0.73
SUPT16H-202ENST00000552829 CBLBQ13191 982 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms