RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 WDYHV1Q96HA8 205 aa11.36□□□□□ -0.59
SNRPF-204ENST00000552085 JSRP1Q96MG2 331 aaPredicted RBP11.36□□□□□ -0.59
SNRPF-204ENST00000552085 PANX2Q96RD6 677 aa11.36□□□□□ -0.59
SNRPF-204ENST00000552085 PKP4Q99569 1192 aa11.36□□□□□ -0.59
SNRPF-204ENST00000552085 CHP1Q99653 195 aa11.36□□□□□ -0.59
SNRPF-204ENST00000552085 TM9SF2Q99805 663 aa11.36□□□□□ -0.59
SNRPF-204ENST00000552085 OSBPL8Q9BZF1 889 aa11.36□□□□□ -0.59
SNRPF-204ENST00000552085 FAM129AQ9BZQ8 928 aa11.36□□□□□ -0.59
SNRPF-204ENST00000552085 C12orf65Q9H3J6 166 aaKnown RBP11.36□□□□□ -0.59
SNRPF-204ENST00000552085 ACBD3Q9H3P7 528 aa11.36□□□□□ -0.59
SNRPF-204ENST00000552085 GOLPH3Q9H4A6 298 aa11.36□□□□□ -0.59
SNRPF-204ENST00000552085 TSR3Q9UJK0 312 aaKnown RBP11.36□□□□□ -0.59
SNRPF-204ENST00000552085 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.35□□□□□ -0.59
SNRPF-204ENST00000552085 MACROD2A1Z1Q3 448 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 ERI2A8K979 691 aaKnown RBP11.35□□□□□ -0.59
SNRPF-204ENST00000552085 MSTNO14793 375 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 TCF21O43680 179 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 AVILO75366 819 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 TJP3O95049 919 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 GAS8O95995 478 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 B3GALT4O96024 378 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 PLAUP00749 431 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 IGHV4-39P01824 125 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 TPM3P06753 285 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 ALOX12P18054 663 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 IGFBP5P24593 272 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 ADRA1DP25100 572 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 ATP5DP30049 168 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 CCKARP32238 428 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 CTNNA1P35221 906 aaKnown RBP11.35□□□□□ -0.59
SNRPF-204ENST00000552085 COILP38432 576 aaPredicted RBP11.35□□□□□ -0.59
SNRPF-204ENST00000552085 EEF1A1P68104 462 aaKnown RBP11.35□□□□□ -0.59
SNRPF-204ENST00000552085 TBL3Q12788 808 aaKnown RBP11.35□□□□□ -0.59
SNRPF-204ENST00000552085 CDH17Q12864 832 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 SEMA3AQ14563 771 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 PRAMEF20Q5VT98 475 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 EEF1A1P5Q5VTE0 462 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 PTRHD1Q6GMV3 140 aaKnown RBP11.35□□□□□ -0.59
SNRPF-204ENST00000552085 CAPN13Q6MZZ7 669 aaPredicted RBP11.35□□□□□ -0.59
SNRPF-204ENST00000552085 NIPAL1Q6NVV3 410 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 PLXDC2Q6UX71 529 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 LDB1Q86U70 411 aaPredicted RBP11.35□□□□□ -0.59
SNRPF-204ENST00000552085 RFLNBQ8N5W9 214 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 C3orf56Q8N813 242 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 ZNF740Q8NDX6 193 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 ZPLD1Q8TCW7 415 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 ZNF480Q8WV37 535 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 C1orf159Q96HA4 380 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 FAM111AQ96PZ2 611 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 RHNO1Q9BSD3 238 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 P2RY12Q9H244 342 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 ABHD10Q9NUJ1 306 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 PIH1D1Q9NWS0 290 aaKnown RBP11.35□□□□□ -0.59
SNRPF-204ENST00000552085 IFNKQ9P0W0 207 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 SLC2A6Q9UGQ3 507 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 ANAPC5Q9UJX4 755 aa11.35□□□□□ -0.59
SNRPF-204ENST00000552085 LRRC14BA6NHZ5 514 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 PSMD12O00232 456 aaPredicted RBP11.34□□□□□ -0.59
SNRPF-204ENST00000552085 LCMT2O60294 686 aaKnown RBP11.34□□□□□ -0.59
SNRPF-204ENST00000552085 SLC16A8O95907 504 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 RNH1P13489 461 aaKnown RBP11.34□□□□□ -0.59
SNRPF-204ENST00000552085 CYP4B1P13584 511 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 ZNF16P17020 682 aaPredicted RBP11.34□□□□□ -0.59
SNRPF-204ENST00000552085 ITGA2P17301 1181 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 CHRM3P20309 590 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 RPS3P23396 243 aaKnown RBP eCLIP11.34□□□□□ -0.593e-17■■■■□ 20
SNRPF-204ENST00000552085 PPP2R1BP30154 601 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 UGT2B10P36537 528 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 CDKN1AP38936 164 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 PRAMEP78395 509 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 GAB1Q13480 694 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 BEX5Q5H9J7 111 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 NHSL2Q5HYW2 709 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 PRR31Q5SQ13 230 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 FAM120AOSQ5T036 256 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 DCST1Q5T197 706 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 CYB5R2Q6BCY4 276 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 LUZP1Q86V48 1076 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 GCNT2Q8N0V5 402 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 PAQR8Q8TEZ7 354 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 UCN3Q969E3 161 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 GTPBP3Q969Y2 492 aaKnown RBP11.34□□□□□ -0.59
SNRPF-204ENST00000552085 FAM118BQ9BPY3 351 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 UGT2B28Q9BY64 529 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 RHBGQ9H310 441 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 PROK2Q9HC23 129 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 FAM114A2Q9NRY5 505 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 SLC6A5Q9Y345 797 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 MMACHCQ9Y4U1 282 aa11.34□□□□□ -0.59
SNRPF-204ENST00000552085 IGHV4-30-2A0A087WSY4 118 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 CEP104O60308 925 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 PSIP1O75475 530 aaKnown RBP11.33□□□□□ -0.6
SNRPF-204ENST00000552085 TRAPPC6AO75865 159 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 TNFSF13O75888 250 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 C1QAP02745 245 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 THBS1P07996 1170 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 CETN2P41208 172 aa11.33□□□□□ -0.6
SNRPF-204ENST00000552085 LOXL1Q08397 574 aaPredicted RBP11.33□□□□□ -0.6
SNRPF-204ENST00000552085 BMPR2Q13873 1038 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms