RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 ABCB9Q9NP78 766 aa14.36□□□□□ -0.11
PDE1B-207ENST00000550620 DNAJC27Q9NZQ0 273 aa14.36□□□□□ -0.11
PDE1B-207ENST00000550620 RHCGQ9UBD6 479 aa14.36□□□□□ -0.11
PDE1B-207ENST00000550620 GABRQQ9UN88 632 aa14.36□□□□□ -0.11
PDE1B-207ENST00000550620 EXO1Q9UQ84 846 aaKnown RBP14.36□□□□□ -0.11
PDE1B-207ENST00000550620 B4DXG7 233 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 QSOX1O00391 747 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 TRIM3O75382 744 aaPredicted RBP14.35□□□□□ -0.11
PDE1B-207ENST00000550620 ZNF821O75541 412 aaPredicted RBP14.35□□□□□ -0.11
PDE1B-207ENST00000550620 SLCO2B1O94956 709 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 GALTP07902 379 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 CSF3P09919 207 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 CST5P28325 142 aaPredicted RBP14.35□□□□□ -0.11
PDE1B-207ENST00000550620 ERP29P30040 261 aaKnown RBP14.35□□□□□ -0.11
PDE1B-207ENST00000550620 SOAT1P35610 550 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 ZNF91Q05481 1191 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 PDE7AQ13946 482 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 E2F2Q14209 437 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 VEPH1Q14D04 833 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 SLC5A12Q1EHB4 618 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 SYTL3Q4VX76 610 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 MFSD4BQ5TF39 518 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 C12orf73Q69YU5 71 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 RFLNAQ6ZTI6 216 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 PHC2Q8IXK0 858 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 HS6ST3Q8IZP7 471 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 CREB3L4Q8TEY5 395 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 AP3S1Q92572 193 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 TRMT61AQ96FX7 289 aaKnown RBP14.35□□□□□ -0.11
PDE1B-207ENST00000550620 DIRAS2Q96HU8 199 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 WRAP53Q9BUR4 548 aaKnown RBP14.35□□□□□ -0.11
PDE1B-207ENST00000550620 ARHGAP39Q9C0H5 1083 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 TMPRSS11EQ9UL52 423 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 SNX11Q9Y5W9 270 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 KCNE2Q9Y6J6 123 aa14.35□□□□□ -0.11
PDE1B-207ENST00000550620 H3BN98 237 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 SGTAO43765 313 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 CELF2O95319 508 aaKnown RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 FURINP09958 794 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 TSPAN19P0C672 248 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 RPL17P18621 184 aaKnown RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 MAPK9P45984 424 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 GSTM5P46439 218 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 GATMP50440 423 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 DSTNP60981 165 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 GALK2Q01415 458 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 OCLNQ16625 522 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 TIGD3Q6B0B8 471 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 ADNP2Q6IQ32 1131 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 UNC5DQ6UXZ4 953 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 CCDC149Q6ZUS6 474 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 TCTE3Q8IZS6 198 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 UBASH3BQ8TF42 649 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 MTERF3Q96E29 417 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 FYTTD1Q96QD9 318 aaKnown RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 OR4K3Q96R72 315 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 TSSK6Q9BXA6 273 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 MCOLN1Q9GZU1 580 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 ACOXLQ9NUZ1 547 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 REV1Q9UBZ9 1251 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 KLHL21Q9UJP4 597 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 LRFN2Q9ULH4 789 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 BACE2Q9Y5Z0 518 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 A0A1W2PQ67 120 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 A0A1W2PQL4 384 aaPredicted RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 MANSC4A6NHS7 340 aaPredicted RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 FAAHO00519 579 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 ARHGEF9O43307 516 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 HBQ1P09105 142 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 SLC10A3P09131 477 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 SLC9A3P48764 834 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 XKP51811 444 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 MXD1Q05195 221 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 C2orf80Q0P641 193 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 LMAN2Q12907 356 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 FOXD4Q12950 439 aaPredicted RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 HNRNPA0Q13151 305 aaKnown RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 HEPACAMQ14CZ8 416 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 DUSP7Q16829 419 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 PYDC2Q56P42 97 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 DCST1Q5T197 706 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 LCN1P1Q5VSP4 162 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 LIPKQ5VXJ0 399 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 SYCE2Q6PIF2 218 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 Q6ZNB5 142 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 TMEM173Q86WV6 379 aaPredicted RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 LIX1LQ8IVB5 337 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 OR56A3Q8NH54 315 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 OR5AK3PQ8NH89 298 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 CIDECQ96AQ7 238 aaPredicted RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 TEFMQ96QE5 360 aaKnown RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 NELL2Q99435 816 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 MRPL9Q9BYD2 267 aaKnown RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 TRIM39Q9HCM9 518 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 TXNL4BQ9NX01 149 aaKnown RBP14.34□□□□□ -0.11
PDE1B-207ENST00000550620 HCSTQ9UBK5 93 aa14.34□□□□□ -0.11
PDE1B-207ENST00000550620 TRBV4-1A0A0J9YWV2 114 aa14.33□□□□□ -0.11
PDE1B-207ENST00000550620 A0A1W2PRB8 838 aa14.33□□□□□ -0.11
PDE1B-207ENST00000550620 C5orf58C9J3I9 102 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms