RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 CRISPLD1Q9H336 500 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.68□□□□□ -0.54
NR4A1-215ENST00000550557 WNT16Q9UBV4 365 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 MED31Q9Y3C7 131 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 TESMINQ9Y4I5 508 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 AQP12BA6NM10 295 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 MAZP56270 477 aaKnown RBP11.68□□□□□ -0.54
NR4A1-215ENST00000550557 RBPJQ06330 500 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 RCAN2Q14206 197 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 KCTD8Q6ZWB6 473 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 AQP12AQ8IXF9 295 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 KLHDC8AQ8IYD2 350 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 PACRGLQ8N7B6 248 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 PDPRQ8NCN5 879 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 OR8K5Q8NH50 307 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 PIH1D2Q8WWB5 315 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 AP3S1Q92572 193 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 COQ7Q99807 217 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 G6PC3Q9BUM1 346 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 TMEM168Q9H0V1 697 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 TM7SF3Q9NS93 570 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 EHD3Q9NZN3 535 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 NFKBIL1Q9UBC1 381 aaPredicted RBP11.68□□□□□ -0.54
NR4A1-215ENST00000550557 POU2F3Q9UKI9 436 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 MYO18AQ92614 2054 aaKnown RBP11.68□□□□□ -0.54
NR4A1-215ENST00000550557 GREB1LQ9C091 1923 aaPredicted RBP11.68□□□□□ -0.54
NR4A1-215ENST00000550557 NPIPA5E9PKD4 350 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 CKMT2P17540 419 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 GABRA3P34903 492 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 RORAP35398 523 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 HTRA4P83105 476 aaPredicted RBP11.68□□□□□ -0.54
NR4A1-215ENST00000550557 MERTKQ12866 999 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 TLR1Q15399 786 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 MAPK14Q16539 360 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 PDCD4Q53EL6 469 aaKnown RBP11.68□□□□□ -0.54
NR4A1-215ENST00000550557 OGFRL1Q5TC84 451 aaPredicted RBP11.68□□□□□ -0.54
NR4A1-215ENST00000550557 MCATQ8IVS2 390 aaKnown RBP11.68□□□□□ -0.54
NR4A1-215ENST00000550557 ARHGAP12Q8IWW6 846 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 OR52E1Q8NGJ3 308 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 PPP1R14BQ96C90 147 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 GPATCH1Q9BRR8 931 aaKnown RBP11.68□□□□□ -0.54
NR4A1-215ENST00000550557 HDAC8Q9BY41 377 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 SEC61A2Q9H9S3 476 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 MBD2Q9UBB5 411 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 ACAD8Q9UKU7 415 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 NPIPA1Q9UND3 350 aa11.68□□□□□ -0.54
NR4A1-215ENST00000550557 PRSS51A0A1B0GVH4 220 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 IRGMA1A4Y4 181 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 CYP4B1P13584 511 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 ENGP17813 658 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 MATN1P21941 496 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 IL12AP29459 219 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 CDK9P50750 372 aaKnown RBP11.67□□□□□ -0.54
NR4A1-215ENST00000550557 RHDQ02161 417 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 GFOD2Q3B7J2 385 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 KIAA1211LQ6NV74 962 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 LRCH3Q96II8 777 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 FAM120CQ9NX05 1096 aaKnown RBP11.67□□□□□ -0.54
NR4A1-215ENST00000550557 BRWD3Q6RI45 1802 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 CXCR6O00574 342 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 TSC22D2O75157 780 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 MTHFD1P11586 935 aaKnown RBP11.67□□□□□ -0.54
NR4A1-215ENST00000550557 ACSL1P33121 698 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 RAB25P57735 213 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 SF3B4Q15427 424 aaKnown RBP eCLIP11.67□□□□□ -0.54
NR4A1-215ENST00000550557 FLYWCH1Q4VC44 716 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 ZNF534Q76KX8 674 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 NANOGNBQ7Z5D8 188 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 LRRC25Q8N386 305 aaPredicted RBP11.67□□□□□ -0.54
NR4A1-215ENST00000550557 SNX33Q8WV41 574 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 REEP4Q9H6H4 257 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 CASKO14936 926 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 GADD45GO95257 159 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 THRBP10828 461 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 IL9P15248 144 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 MAGEA3P43357 314 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 RGRP47804 291 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 HK3P52790 923 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 LSM3P62310 102 aaKnown RBP11.67□□□□□ -0.54
NR4A1-215ENST00000550557 ABHD18Q0P651 414 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 MRPL58Q14197 206 aaKnown RBP11.67□□□□□ -0.54
NR4A1-215ENST00000550557 FAM180AQ6UWF9 173 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 FAM160A2Q8N612 972 aaPredicted RBP11.67□□□□□ -0.54
NR4A1-215ENST00000550557 GATSQ8NAP1 163 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 KDM1BQ8NB78 822 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 ZNF540Q8NDQ6 660 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 OR13H1Q8NG92 308 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 OR52E4Q8NGH9 312 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 CANT1Q8WVQ1 401 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 MOAP1Q96BY2 351 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 PKP4Q99569 1192 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 BCL2L14Q9BZR8 327 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 C6orf106Q9H6K1 298 aaPredicted RBP11.67□□□□□ -0.54
NR4A1-215ENST00000550557 TRNAU1APQ9NX07 287 aaKnown RBP11.67□□□□□ -0.54
NR4A1-215ENST00000550557 LHX3Q9UBR4 397 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 CKLFQ9UBR5 152 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 HS3ST3A1Q9Y663 406 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 EVPLQ92817 2033 aa11.67□□□□□ -0.54
NR4A1-215ENST00000550557 RTCAO00442 366 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms