RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 IFT88Q13099 833 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 TTC19Q6DKK2 380 aaPredicted RBP16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 FAM180AQ6UWF9 173 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 TDRPQ86YL5 185 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 ZCCHC7Q8N3Z6 543 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 KIF2BQ8N4N8 673 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 NFAM1Q8NET5 270 aaPredicted RBP16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 B3GNT7Q8NFL0 401 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 SUN3Q8TAQ9 357 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 SERPINI1Q99574 410 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 SORBS1Q9BX66 1292 aaKnown RBP16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 MS4A12Q9NXJ0 267 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 PSD3Q9NYI0 1048 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 NTNG1Q9Y2I2 539 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 CLDN16Q9Y5I7 305 aa16.12■□□□□ 0.17
CHMP1A-208ENST00000550102 TCP11X1B4DZS4 312 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 PRAMEF2O60811 474 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 CTNSO60931 367 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 CDH16O75309 829 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 GLRA3O75311 464 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 SEMA3DO95025 777 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 KRT15P19012 456 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 CPN2P22792 545 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 PPP2R1BP30154 601 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 NEK2P51955 445 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 VSNL1P62760 191 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 TNFRSF17Q02223 184 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 STX4Q12846 297 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 SLAMF1Q13291 335 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 SERTAD2Q14140 314 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 RASA2Q15283 850 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 ELAVL1Q15717 326 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 RPUSD3Q6P087 351 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 RPS27LQ71UM5 84 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 MILR1Q7Z6M3 343 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 NUDT13Q86X67 352 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 SLC22A9Q8IVM8 553 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 OR4F6Q8NGB9 312 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 EPS8L3Q8TE67 593 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 TMEM237Q96Q45 408 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 ELOVL6Q9H5J4 265 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 LYARQ9NX58 379 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 DCDC2Q9UHG0 476 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 FBXW2Q9UKT8 454 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 RELNP78509 3460 aa16.11■□□□□ 0.17
CHMP1A-208ENST00000550102 ZGRF1Q86YA3 2104 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 TRBV11-1A0A0K0K1C0 115 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 DLX3O60479 287 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 SLU7O95391 586 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 ETHE1O95571 254 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 IFNA16P05015 189 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 HSD17B3P37058 310 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 CDH13P55290 713 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 NR6A1Q15406 480 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 ZNF678Q5SXM1 525 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 LETMD1Q6P1Q0 360 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 GPR180Q86V85 440 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 TMEM132CQ8N3T6 1108 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 APCDD1LQ8NCL9 501 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 GRHL3Q8TE85 626 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 VMP1Q96GC9 406 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 BARD1Q99728 777 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 NPAS2Q99743 824 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 UTP23Q9BRU9 249 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 ZNF717Q9BY31 904 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 DEFB126Q9BYW3 111 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 DDX31Q9H8H2 851 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 TRPS1Q9UHF7 1281 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 SNX6Q9UNH7 406 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 PPIEQ9UNP9 301 aaKnown RBP16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 STK38LQ9Y2H1 464 aa16.1■□□□□ 0.17
CHMP1A-208ENST00000550102 SPTBN1Q01082 2364 aaKnown RBP16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 USP9YO00507 2555 aaPredicted RBP16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 A0A0A6YYD5 115 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 A0A1W2PPM1 405 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 GABRR3A8MPY1 467 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 MAN1A2O60476 641 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 LDB3O75112 727 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 EEDO75530 441 aaKnown RBP16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 SUPT7LO94864 414 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 NR2F6P10588 404 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 TSPAN8P19075 237 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 TLX1P31314 330 aaPredicted RBP16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 BSGP35613 385 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 BUD31P41223 144 aaPredicted RBP16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 CLCN2P51788 898 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 HNRNPH2P55795 449 aaKnown RBP16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 CLCQ05315 142 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 TUBA3CQ13748 450 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 TUBA3EQ6PEY2 450 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 CYP20A1Q6UW02 462 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 RPS19BP1Q86WX3 136 aaKnown RBP16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 BCORP1Q8N888 145 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 C7orf57Q8NEG2 295 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 MYRIPQ8NFW9 859 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 OR14A16Q8NHC5 309 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 TRPC4APQ8TEL6 797 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 CCDC126Q96EE4 140 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 L3HYPDHQ96EM0 354 aa16.09■□□□□ 0.17
CHMP1A-208ENST00000550102 ZNF382Q96SR6 550 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms