RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 SF3A3Q12874 501 aaKnown RBP eCLIP19.97■□□□□ 0.79
VPS29-206ENST00000549578 MINDY4Q4G0A6 757 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 C18orf63Q68DL7 685 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 CDC26Q8NHZ8 85 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 C16orf78Q8WTQ4 265 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 TM4SF18Q96CE8 201 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 CHMP6Q96FZ7 201 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 MAELQ96JY0 434 aaKnown RBP19.97■□□□□ 0.79
VPS29-206ENST00000549578 OR1F2PQ96R84 312 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 OR52B2Q96RD2 323 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 EBF4Q9BQW3 602 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 GPR87Q9BY21 358 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 DCTN4Q9UJW0 460 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 NXT1Q9UKK6 140 aaKnown RBP19.97■□□□□ 0.79
VPS29-206ENST00000549578 PADI2Q9Y2J8 665 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 SPACA6W5XKT8 324 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 PROM1O43490 865 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 TGDSO95455 350 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 SDC1P18827 310 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 TACR1P25103 407 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 IDH3AP50213 366 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 EFNA3P52797 238 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 TAS2R50P59544 299 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 TNFRSF17Q02223 184 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 ZNF763Q0D2J5 394 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 NXNQ6DKJ4 435 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 MMP21Q8N119 569 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 ADAMTS18Q8TE60 1221 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 UCN3Q969E3 161 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 TRIM55Q9BYV6 548 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 MS4A12Q9NXJ0 267 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 KCND3Q9UK17 655 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 TCFL5Q9UL49 500 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 MKL2Q9ULH7 1088 aa19.97■□□□□ 0.79
VPS29-206ENST00000549578 NUP210LQ5VU65 1888 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 DMXL2Q8TDJ6 3036 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 AIFM1O95831 613 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 IL3P08700 152 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 NR2F6P10588 404 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 BCKDHAP12694 445 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 LBPP18428 481 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 IL10P22301 178 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 BUD31P41223 144 aaPredicted RBP19.96■□□□□ 0.79
VPS29-206ENST00000549578 ERVK-8P63133 956 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 EMX2Q04743 252 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 NDUFAF5Q5TEU4 345 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 IL23RQ5VWK5 629 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 OR2Y1Q8NGV0 311 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 DCBLD2Q96PD2 775 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 CRB3Q9BUF7 120 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 VN1R1Q9GZP7 353 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 BAIAP2L1Q9UHR4 511 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 RAXQ9Y2V3 346 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 PCDHGA6Q9Y5G7 932 aa19.96■□□□□ 0.79
VPS29-206ENST00000549578 GLOD5A6NK44 160 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 UMODP07911 640 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 CD63P08962 238 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 TROVE2P10155 538 aaKnown RBP eCLIP19.95■□□□□ 0.78
VPS29-206ENST00000549578 JAK1P23458 1154 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 MAPK1P28482 360 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 EIF2S3P41091 472 aaKnown RBP19.95■□□□□ 0.78
VPS29-206ENST00000549578 FOLR3P41439 243 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 TRA2BP62995 288 aaKnown RBP19.95■□□□□ 0.78
VPS29-206ENST00000549578 BTG2P78543 158 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 TUBB8Q3ZCM7 444 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 LIX1Q8N485 282 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 CLHC1Q8NHS4 586 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 ACTRT2Q8TDY3 377 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 ZCCHC14Q8WYQ9 949 aaKnown RBP19.95■□□□□ 0.78
VPS29-206ENST00000549578 EGLN2Q96KS0 407 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 TSSK3Q96PN8 268 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 DPH1Q9BZG8 443 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 KCNK13Q9HB14 408 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 C3orf18Q9UK00 162 aa19.95■□□□□ 0.78
VPS29-206ENST00000549578 MRPS33Q9Y291 106 aaKnown RBP19.95■□□□□ 0.78
VPS29-206ENST00000549578 A0A0G2JND7 137 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 WASHC1A8K0Z3 465 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 IDSB3KWA1 339 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 GUCY1B2O75343 617 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 WT1P19544 449 aaPredicted RBP19.94■□□□□ 0.78
VPS29-206ENST00000549578 TLX1P31314 330 aaPredicted RBP19.94■□□□□ 0.78
VPS29-206ENST00000549578 DIO3P55073 304 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 MC1RQ01726 317 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 RHAGQ02094 409 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 MAD2L1Q13257 205 aaPredicted RBP19.94■□□□□ 0.78
VPS29-206ENST00000549578 SMU1Q2TAY7 513 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 LSM12Q3MHD2 195 aaKnown RBP19.94■□□□□ 0.78
VPS29-206ENST00000549578 OGFOD2Q6N063 350 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 ACAD11Q709F0 780 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 RPF2Q9H7B2 306 aaKnown RBP19.94■□□□□ 0.78
VPS29-206ENST00000549578 MYNNQ9NPC7 610 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 TCF7L2Q9NQB0 619 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 NOP53Q9NZM5 478 aaKnown RBP19.94■□□□□ 0.78
VPS29-206ENST00000549578 HEY2Q9UBP5 337 aa19.94■□□□□ 0.78
VPS29-206ENST00000549578 EIF3LQ9Y262 564 aaKnown RBP19.94■□□□□ 0.78
VPS29-206ENST00000549578 PGRMC2O15173 223 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 RECKO95980 971 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 HEXBP07686 556 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 ALDOCP09972 364 aaKnown RBP19.93■□□□□ 0.78
VPS29-206ENST00000549578 ACPPP15309 386 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms