RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 OR5P2Q8WZ92 322 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 ANKRD60Q9BZ19 345 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 CWH43Q9H720 699 aa15.59■□□□□ 0.09
CUX1-213ENST00000549414 AGXTP21549 392 aa15.58■□□□□ 0.09
CUX1-213ENST00000549414 MYF6P23409 242 aa15.58■□□□□ 0.09
CUX1-213ENST00000549414 TMEM107Q6UX40 140 aa15.58■□□□□ 0.09
CUX1-213ENST00000549414 GOLM1Q8NBJ4 401 aa15.58■□□□□ 0.09
CUX1-213ENST00000549414 ISG20Q96AZ6 181 aaKnown RBP15.58■□□□□ 0.09
CUX1-213ENST00000549414 C11orf24Q96F05 449 aaPredicted RBP15.58■□□□□ 0.09
CUX1-213ENST00000549414 RDH12Q96NR8 316 aa15.58■□□□□ 0.09
CUX1-213ENST00000549414 MRPL39Q9NYK5 338 aaKnown RBP15.58■□□□□ 0.09
CUX1-213ENST00000549414 PEX16Q9Y5Y5 336 aa15.58■□□□□ 0.09
CUX1-213ENST00000549414 IRGMA1A4Y4 181 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 DPYSL5Q9BPU6 564 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 CPEB1Q9BZB8 566 aaKnown RBP15.58■□□□□ 0.08
CUX1-213ENST00000549414 CNOT11Q9UKZ1 510 aaKnown RBP15.58■□□□□ 0.08
CUX1-213ENST00000549414 RNF6Q9Y252 685 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 ST14Q9Y5Y6 855 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 EIF3FO00303 357 aaPredicted RBP15.58■□□□□ 0.08
CUX1-213ENST00000549414 SLC1A7O00341 560 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 CLPXO76031 633 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 STSP08842 583 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 SBK3P0C264 359 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 SOX9P48436 509 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 TAF13Q15543 124 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 RPS26P11Q5JNZ5 115 aaPredicted RBP15.58■□□□□ 0.08
CUX1-213ENST00000549414 USP43Q70EL4 1123 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 ABHD13Q7L211 337 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.58■□□□□ 0.081e-9■□□□□ 9.1
CUX1-213ENST00000549414 ZNF248Q8NDW4 579 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 MAPKAP1Q9BPZ7 522 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 OR51I1Q9H343 314 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 RDH14Q9HBH5 336 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 MCUBQ9NWR8 336 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 DAPL1A0PJW8 107 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 ZNF195O14628 629 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 FADDQ13158 208 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 GINS1Q14691 196 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 SLC5A8Q8N695 610 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 NATD1Q8N6N6 113 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 SHDQ96IW2 340 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 ZNF597Q96LX8 424 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 C5orf34Q96MH7 638 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 TTTY10Q9BZA0 68 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 IL1RAPQ9NPH3 570 aa15.58■□□□□ 0.08
CUX1-213ENST00000549414 PNO1Q9NRX1 252 aaKnown RBP15.58■□□□□ 0.08
CUX1-213ENST00000549414 ANHXE9PGG2 379 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 ACOX3O15254 700 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 CCNKO75909 580 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 LRRC26Q2I0M4 334 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 RUNDC3AQ59EK9 446 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 CHCHD4Q8N4Q1 142 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 DTD2Q96FN9 168 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 TMEM19Q96HH6 336 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 MCHR1Q99705 422 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 SLC17A9Q9BYT1 436 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 ZDHHC7Q9NXF8 308 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 AHCTF1Q8WYP5 2266 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 GABRR3A8MPY1 467 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 H0YJX3 145 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 M0R129 80 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 REM1O75628 298 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 TNFP01375 233 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 LHCGRP22888 699 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 AHCYP23526 432 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 PSMB5P28074 263 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 MVKQ03426 396 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 MRPL58Q14197 206 aaKnown RBP15.57■□□□□ 0.08
CUX1-213ENST00000549414 TRIM71Q2Q1W2 868 aaKnown RBP15.57■□□□□ 0.08
CUX1-213ENST00000549414 FRRS1Q6ZNA5 592 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 OR56A1Q8NGH5 318 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 SETD7Q8WTS6 366 aaKnown RBP15.57■□□□□ 0.08
CUX1-213ENST00000549414 TFAP2CQ92754 450 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 BARD1Q99728 777 aaKnown RBP15.57■□□□□ 0.08
CUX1-213ENST00000549414 IL21RQ9HBE5 538 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 MAFFQ9ULX9 164 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 HS3ST2Q9Y278 367 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 CHST10O43529 356 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 VSX2P58304 361 aaPredicted RBP15.57■□□□□ 0.08
CUX1-213ENST00000549414 SIM1P81133 766 aaPredicted RBP15.57■□□□□ 0.08
CUX1-213ENST00000549414 RGNQ15493 299 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 KLHL22Q53GT1 634 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 EOGTQ5NDL2 527 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 LHX8Q68G74 356 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 BHLHA9Q7RTU4 235 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 OR9Q2Q8NGE9 314 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 UFD1Q92890 307 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 PDLIM5Q96HC4 596 aaKnown RBP15.57■□□□□ 0.08
CUX1-213ENST00000549414 GAL3ST1Q99999 423 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 OR6C74A6NCV1 312 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 ACOT8O14734 319 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 NUDT7P0C024 238 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 ACADLP28330 430 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 POLR2IP36954 125 aaKnown RBP15.57■□□□□ 0.08
CUX1-213ENST00000549414 MASP1P48740 699 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 NDUFAF6Q330K2 333 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 AKAP14Q86UN6 197 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 JAZF1Q86VZ6 243 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 NCSTNQ92542 709 aa15.57■□□□□ 0.08
CUX1-213ENST00000549414 MAELQ96JY0 434 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms