RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 CTAGE3PQ8IX95 158 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 KLHDC8AQ8IYD2 350 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 TBC1D19Q8N5T2 526 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 PPM1NQ8N819 430 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 C16orf52Q8NHV5 167 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 SLC5A11Q8WWX8 675 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 ZNF592Q92610 1267 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 RHBDF1Q96CC6 855 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 COX4I2Q96KJ9 171 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 TSNARE1Q96NA8 513 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 CDCP1Q9H5V8 836 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 ZNF395Q9H8N7 513 aaPredicted RBP11.35□□□□□ -0.59
DDX54-206ENST00000549271 DMRT3Q9NQL9 472 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 CRIM1Q9NZV1 1036 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 SLC22A14Q9Y267 594 aa11.35□□□□□ -0.59
DDX54-206ENST00000549271 IGKV3D-11A0A0A0MRZ8 115 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 TCRBV16S1A1N1A0A5B0 115 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 PABPN1LA6NDY0 278 aaKnown RBP11.34□□□□□ -0.59
DDX54-206ENST00000549271 ZNF860A6NHJ4 632 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 SAGE2PA6NJ88 616 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 TAPBPO15533 448 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 OR1F1O43749 312 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 HS6ST1O60243 411 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 PRMT3O60678 531 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 DNAJB6O75190 326 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 SMIM10L1P0DMW3 83 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 STMN1P16949 149 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 TPP2P29144 1249 aaPredicted RBP11.34□□□□□ -0.59
DDX54-206ENST00000549271 SPRP35270 261 aaPredicted RBP11.34□□□□□ -0.59
DDX54-206ENST00000549271 GDF5P43026 501 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 CYB561P49447 251 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 HNMTP50135 292 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 HLCSP50747 726 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 MLF1P58340 268 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 RGS1Q08116 209 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 DLG1Q12959 904 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 SNTB1Q13884 538 aaKnown RBP11.34□□□□□ -0.59
DDX54-206ENST00000549271 KEAP1Q14145 624 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 EFTUD2Q15029 972 aaKnown RBP eCLIP11.34□□□□□ -0.59
DDX54-206ENST00000549271 TGFBIQ15582 683 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 OR4D1Q15615 310 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 DEFB134Q4QY38 66 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 ARHGAP11AQ6P4F7 1023 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 NXPE4Q6UWF7 544 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 ABHD13Q7L211 337 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 LIX1LQ8IVB5 337 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 NFAM1Q8NET5 270 aaPredicted RBP11.34□□□□□ -0.59
DDX54-206ENST00000549271 UTP15Q8TED0 518 aaKnown RBP11.34□□□□□ -0.59
DDX54-206ENST00000549271 TSPAN17Q96FV3 270 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 SMIM10Q96HG1 83 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 RBCK1Q9BYM8 510 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 SLC6A16Q9GZN6 736 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 PELI2Q9HAT8 420 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 TXNDC16Q9P2K2 825 aa11.34□□□□□ -0.59
DDX54-206ENST00000549271 HMX2A2RU54 273 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 URADA6NGE7 173 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 CDC40O60508 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDX54-206ENST00000549271 SLC35E2BP0CK96 405 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 STX2P32856 288 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 GGT5P36269 586 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 ZFP36L2P47974 494 aaKnown RBP11.33□□□□□ -0.6
DDX54-206ENST00000549271 RAB10P61026 200 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 REEP5Q00765 189 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 HYAL2Q12891 473 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 TERF2Q15554 542 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 SHEQ5VZ18 495 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 SLCO4C1Q6ZQN7 724 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 CMC1Q7Z7K0 106 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 GPSM1Q86YR5 675 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 CIARTQ8N365 385 aaPredicted RBP11.33□□□□□ -0.6
DDX54-206ENST00000549271 KIF2BQ8N4N8 673 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 ANKRD53Q8N9V6 530 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 TRPV3Q8NET8 790 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 OR5M3Q8NGP4 307 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 KIAA1191Q96A73 305 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 PTCHD1Q96NR3 888 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 EGFL8Q99944 293 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 TMEM79Q9BSE2 394 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 AICDAQ9GZX7 198 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 NEUROD4Q9HD90 331 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 PRDM9Q9NQV7 894 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 CBLCQ9ULV8 474 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 PPIEQ9UNP9 301 aaKnown RBP11.33□□□□□ -0.6
DDX54-206ENST00000549271 DYRK1BQ9Y463 629 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 KCNE2Q9Y6J6 123 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 ARHGAP21Q5T5U3 1957 aa11.33□□□□□ -0.6
DDX54-206ENST00000549271 ANK3Q12955 4377 aaKnown RBP11.33□□□□□ -0.6
DDX54-206ENST00000549271 CHD3Q12873 2000 aaKnown RBP11.32□□□□□ -0.6
DDX54-206ENST00000549271 A0A0G2JNJ9 132 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 NCF1BA6NI72 391 aaPredicted RBP11.32□□□□□ -0.6
DDX54-206ENST00000549271 NCF1CA8MVU1 366 aaPredicted RBP11.32□□□□□ -0.6
DDX54-206ENST00000549271 INAFM1C9JVW0 142 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 PRAMEF4O60810 478 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 B4GALT2O60909 372 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 B3GALT4O96024 378 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 TUBB4AP04350 444 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 SERPINA6P08185 405 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 ZNF888P0CJ79 500 aaPredicted RBP11.32□□□□□ -0.6
DDX54-206ENST00000549271 C1GALT1C1LP0DN25 315 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 RNH1P13489 461 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms