RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KAT8Q9H7Z6 458 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 CD320Q9NPF0 282 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 STX18Q9P2W9 335 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 ZNHIT2Q9UHR6 403 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 MAGEL2Q9UJ55 1249 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 LIPT1Q9Y234 373 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 HEY1Q9Y5J3 304 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 SLC30A1Q9Y6M5 507 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 KIAA0513O60268 411 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 UQCRC2P22695 453 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 ADH6P28332 368 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 TPP2P29144 1249 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 GRIA3P42263 894 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 CCR8P51685 355 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 AGFG1P52594 562 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 HNRNPKP61978 463 aaKnown RBP eCLIP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 SERTAD2Q14140 314 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 KEAP1Q14145 624 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 ANKRD39Q53RE8 183 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 C6orf136Q5SQH8 315 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 FAM205BPQ63HN1 556 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 FAM117BQ6P1L5 589 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 VN1R4Q7Z5H5 301 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 AMZ2Q86W34 360 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 THOC6Q86W42 341 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 C1orf210Q8IVY1 113 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 YAF2Q8IY57 180 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 RNF113BQ8IZP6 322 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 LINC00528Q8N1L1 170 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 OR2T11Q8NH01 316 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 C9orf72Q96LT7 481 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 TRNT1Q96Q11 434 aaKnown RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 RAB3IPQ96QF0 476 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 MYCBPQ99417 103 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 ACPTQ9BZG2 426 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 WNT10AQ9GZT5 417 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 DENND2DQ9H6A0 471 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 XPR1Q9UBH6 696 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 LEF1Q9UJU2 399 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 C19orf53Q9UNZ5 99 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-212ENST00000549162 HIF3AQ9Y2N7 669 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 TMEM98Q9Y2Y6 226 aa4.62□□□□□ -1.67
SCAF11-212ENST00000549162 A6NLC8 198 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 KCNK1O00180 336 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 UPK1AO00322 258 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 KLF8O95600 359 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 GHRHP01286 108 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SKP1P63208 163 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 RBBP7Q16576 425 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 CDO1Q16878 200 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 FRG2Q64ET8 278 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 RWDD4Q6NW29 188 aaKnown RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 CES3Q6UWW8 571 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 CBLL1Q75N03 491 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 TSPAN33Q86UF1 283 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 CRLF3Q8IUI8 442 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 TRAPPC5Q8IUR0 188 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 BBS10Q8TAM1 723 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 LRRC8CQ8TDW0 803 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF501Q96CX3 271 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 NSL1Q96IY1 281 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 FRG2BQ96QU4 278 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 RIOK2Q9BVS4 552 aaKnown RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF350Q9GZX5 532 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 HAO2Q9NYQ3 351 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 C5AR2Q9P296 337 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 RIMS3Q9UJD0 308 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SLC6A14Q9UN76 642 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 A0A087WZY1 265 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 A0A1W2PNV4 684 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ACOD1A6NK06 481 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 H3BSA7 217 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 K7ERQ8 282 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ATXN7O15265 892 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 GALR3O60755 368 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 AVILO75366 819 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 GPX5O75715 221 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ALX3O95076 343 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 VAPBO95292 243 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SLC35E2P0CK97 266 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ERVK-10P10266 1014 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 RYKP34925 604 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SLC15A1P46059 708 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 PTDSS1P48651 473 aaKnown RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 NTHL1P78549 312 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 MESP2Q0VG99 397 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 KLF10Q13118 480 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 DUSP8Q13202 625 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 GNA13Q14344 377 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ATP6AP1Q15904 470 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ADRM1Q16186 407 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF630Q2M218 657 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 RFTN2Q52LD8 501 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-212ENST00000549162 PPM1JQ5JR12 505 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 LRRC73Q5JTD7 316 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 FAM182AQ5T1J6 154 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SDHAF4Q5VUM1 108 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 LRRC74BQ6ZQY2 392 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 FRA10AC1Q70Z53 315 aa4.61□□□□□ -1.67
SCAF11-212ENST00000549162 SPRED2Q7Z698 418 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms