RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 WDR87Q6ZQQ6 2873 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 A0A096LPK6 155 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 B4DGG1 531 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 STMND1H3BQB6 276 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 KDELR3O43731 214 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 PRAMEF11O60813 436 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ZNF821O75541 412 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 JRKO75564 520 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 PEX11BO96011 259 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 IFNB1P01574 187 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 HLA-DQB2P05538 268 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ZSCAN5DPP0CG00 497 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ZNF20P17024 532 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 LBPP18428 481 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 AOC1P19801 751 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ACHEP22303 614 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 MSNP26038 577 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 SERPINB6P35237 376 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 SERPINH1P50454 418 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 NDST2P52849 883 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 TFDP2Q14188 446 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ZNF235Q14590 738 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 IHHQ14623 411 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 SIX1Q15475 284 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 PARP15Q460N3 678 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 NSUN5P2Q63ZY6 315 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ZNF782Q6ZMW2 699 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 ZBTB49Q6ZSB9 765 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 CCDC190Q86UF4 302 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 CAMK1DQ8IU85 385 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 MMAAQ8IVH4 418 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 KLHL7Q8IXQ5 586 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 CCDC110Q8TBZ0 833 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 WFIKKN2Q8TEU8 576 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 DVL3Q92997 716 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 CABS1Q96KC9 395 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 OLFM3Q96PB7 478 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 RTN4RQ9BZR6 473 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 FAM234AQ9H0X4 552 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 PDFQ9HBH1 243 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 MKKSQ9NPJ1 570 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 PNRC2Q9NPJ4 139 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 PRSS16Q9NQE7 514 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 RBM22Q9NW64 420 aaKnown RBP eCLIP3.6□□□□□ -1.83
APAF1-208ENST00000549007 ARGLU1Q9NWB6 273 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 RCOR3Q9P2K3 495 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 THAP10Q9P2Z0 257 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 LHX3Q9UBR4 397 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 HPCAL4Q9UM19 191 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 USP34Q70CQ2 3546 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 TMEM247A6NEH6 219 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 FAM47DPA6NHR8 397 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 A8MX80 341 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 APOC4-APOC2K7ER74 178 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 KCNN4O15554 427 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ST8SIA3O43173 380 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 SYNCRIPO60506 623 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 NME6O75414 186 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 NEBLO76041 1014 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 JTBO76095 146 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ACSL3O95573 720 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 IL1BP01584 269 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 APOC2P02655 101 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 UGT2B4P06133 528 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 CTSLP07711 333 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 CETN2P41208 172 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 TNFRSF4P43489 277 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 CENPAP49450 140 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 CCNHP51946 323 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 CAPZA1P52907 286 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 CSTF1Q05048 431 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 C2orf54Q08AI8 447 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 UBE2V1Q13404 147 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 PCGF3Q3KNV8 242 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 KLHL26Q53HC5 615 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 C9orf64Q5T6V5 341 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 TTC27Q6P3X3 843 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ISLR2Q6UXK2 745 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 PRELID2Q8N945 189 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 SPATA22Q8NHS9 363 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 GANCQ8TET4 914 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 PDCD6IPQ8WUM4 868 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 ST6GALNAC6Q969X2 333 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 MSI2Q96DH6 328 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 ZNF503Q96F45 646 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ZNF570Q96NI8 536 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 TMEM237Q96Q45 408 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 APOL2Q9BQE5 337 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 DDX47Q9H0S4 455 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 CARD9Q9H257 536 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 SPAG4Q9NPE6 437 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 HINT3Q9NQE9 182 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 ITM2BQ9Y287 266 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 KLHL20Q9Y2M5 609 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 VPS13AQ96RL7 3174 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 CCDC151A5D8V7 595 aa3.59□□□□□ -1.83
APAF1-208ENST00000549007 PGRMC1O00264 195 aaKnown RBP3.59□□□□□ -1.83
APAF1-208ENST00000549007 KPNA3O00505 521 aaPredicted RBP3.59□□□□□ -1.83
APAF1-208ENST00000549007 MCF2LO15068 1137 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms